Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02266 ATGGTTTCCAGTATCATTGTGTACGTAATATGTATTGTGATATGGTTCGTATTCTTAGAATCAAGAGCTTTGGCCCAATTCCAATATCTTCTTCCTCCTCAACCACAAAACTACAATGGCACTGGCAGTCCCTCAACTGCAACTGAAACTGCACCTTCTTCTTTTTCACCATTAGCACCCGCGTTGTTCGTGATGGGAGACTCCCCGGTTGATTGTGGAACCAACAATTACCTGGGAACCTTTGCACGTGCCGATCACCTTCCTTATGGAAGAGATTTCGATACCCACCAACCCTCCGGAAGATTCTCTAATGGAAGGATCCCAGTGGATTATCTTGCTCTGCATCTAGGGCTTCCTTTCGTGCCAAGTTATCTTGGACAGCCAGGAACCGTGGACGATATGATTCACGGTGTCAATTACGCTTCTGCTGCTGCTGGCATTATTCTCTCAAGTGGCTCTGAACTCGGTCAGCATATTTCCTTCACTCAGCAAATTCAGCAATTCACAGACACTCTTCAGCAGTTTATATTGACTATGGGAGAGGACGCTGCAACCACTTTTATATCTGATTCTGTTTTTTATATTTCCATTGGAATCAACGACTACATTCATTATTATTTGCTCAATGTCTCCGACGTCAATAATTTGTACCTTCCATGGCGCTTCAACCAGTTTTTGGCATCTTCACTCAGGCAACAAATCAAGAACTTGTACAATTTAAATGTTAGGAAAGTGGTAGTCACGGGACTTGCCCCTATTGGCTGTGCCCCTCACTACTTGTGGCAGTACGGTAGTGAAAATGGAGAATGTGTTGAGCAGATAAATGACATGACCATTGAATTCAACTTCCTCATGAGATACATGGTTGAAAAGCTTGGTGCAGAGCTCCCTGATGCCAAAATTATCTTCTGTGACGTGTTTGAAGGTTCCATGGATATTTTAAAGAATCATGAACGTTATGGCTTTAATGTCACGTCTGAGGCCTGCTGTGGATTCGGGGAGTACAAGGGATGGTTCATGTGCTTATCACCGGAAATGGCATGCAGTAATGCTTCCAACTATATCTGGTGGGACCAGTTCCATCCAACTGATGCAGTGAATGCAATTCTGGCTGACAATATATGGAATGGTCTGCACACTAAAATGTGCTATCCTATGAACTTGGAGGACATGGTTATTCAGAAGGCAAAATGA 1194 0.4347 MVSSIIVYVICIVIWFVFLESRALAQFQYLLPPQPQNYNGTGSPSTATETAPSSFSPLAPALFVMGDSPVDCGTNNYLGTFARADHLPYGRDFDTHQPSGRFSNGRIPVDYLALHLGLPFVPSYLGQPGTVDDMIHGVNYASAAAGIILSSGSELGQHISFTQQIQQFTDTLQQFILTMGEDAATTFISDSVFYISIGINDYIHYYLLNVSDVNNLYLPWRFNQFLASSLRQQIKNLYNLNVRKVVVTGLAPIGCAPHYLWQYGSENGECVEQINDMTIEFNFLMRYMVEKLGAELPDAKIIFCDVFEGSMDILKNHERYGFNVTSEACCGFGEYKGWFMCLSPEMACSNASNYIWWDQFHPTDAVNAILADNIWNGLHTKMCYPMNLEDMVIQKAK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02266 397 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 60 389 - -
Rops1g02266 397 Gene3D SGNH hydrolase 54 382 IPR036514 -
Rops1g02266 397 CDD SGNH_plant_lipase_like 60 377 IPR035669 -
Rops1g02266 397 Pfam GDSL-like Lipase/Acylhydrolase 62 373 IPR001087 GO:0016788
Rops1g02266 397 SUPERFAMILY SGNH hydrolase 62 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02266 Rops-Chr1 44762680 44764997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02266 23 392 Acyl Lipid Metabolism Gene Families AT4G10950 65.323 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02266 - - gmx:100788021 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02266 1 44762680 44764997 Rops1g02266 1 44762680 44764997 ECH