Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02241 ATGTCTTCATCCAAAGACGCAGACCCAACCCTGGGTTACCTCACTCGGAAGGACACGGAGGTGAAGCTTCCTCGTCCAACAAGAGTAAAGAACAAAACCCCCGCTCCCATTCAGATCACAGCGGAGCAGATTCTTCGTGAGGCTCGTGAGCGTCAAGAGGCTGAGATCCGTCCTCCGAAGCAGAAAATCACCGATGCAACTGAGCTCGGCGAGTATCGTCTTCGAAAGCGAAAAGAATTCGAGGACCTAATCCGGCGAGTTCGTTGGAACGTAAGCGTATGGATCAAATACGCACAGTGGGAAGAGTCACAAAAAGACTTCAAACGCGCACGCTCTGTTTGGGAAAGAGCATTAGAGGTAGACTACAAGAACCACACCCTATGGCTCAAATACGCAGAGGTAGAGATGAAGAACAAGTTCATAAACCACGCAAGGAACGTTTGGGACCGTGCTGTGACACTTTTACCGAGAGTGGATCAGTTATGGTACAAATACATTCACATGGAGGAGATGCTCGGCAATGTCGCCGGAGCGAGACAGGTTTTCGAGAGATGGATGAAATGGATGCCTGATCAACAAGGTTGGCTCTCTTACATCAAATTCGAGCTTCGATACAATGAAATTGAACGAGCCAGAGGAATATTCGAGAGATTCGTTCAGTGTCACCCTAAGGTTGGGGCTTGGATTCGCTATGCGAAGTTTGAGATGAAGAATGGCGAGGTTGCTAAGTCGAGGAACGTTTACGAAAGAGCAGTGGAGAAGCTTGCGGATGATGAGGAAGCTGAGCAGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAAACGGAGCGTGCGAGATGTATATATAAGTTTGCACTTGATCATATTCCTAAAGGAAGGGCAGAAGACTTGTATCGCAAGTTTGTGGCCTTTGAAAAACAGTATGGTGACAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTTAGGAAAAATCCTTTGAATTATGATTCTTGGTTTGATTATATAAGATTGGAAGAAAGTGTGGGGAATAAAGAAAGAATCAGGGAGGTTTATGAGAGAGCTATAGCTAATGTTCCTCCAGCTGAGGAGAAGCGGTACTGGCAGAGATATATCTATTTATGGATTAATTATGCACTGTACGAAGAGCTTGATGCTGGAGATATGGAGCGAACAAGAGATGTATACAGGGAGTGTCTCAACCAGATACCTCACCACAAGTTCTCATTTGCAAAGATATGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCAAGGCTGCTCGTCAAATATTAGGAAATGCTATTGGAAAGGCTCCTAAAGATAAGATTTTTAAAAAGTATATAGAGATAGAACTGCAGCTTGGTAATATGGATCGATGCAGAAAACTGTATGAGAAGTATCTGGAGTGGACGCCTGAAAATTGCTATGCTTGGAGCAAATATGCAGAATTGGAGAGATCTTTATCTGAGACTGAACGAGCTAGAGCAATATTTGAGGTTGCAATTGCCCAACCAGCATTAGACATGCCTGAGCTGTTGTGGAAGGCATACATTGACTTTGAGACCGATGAGGGTGAATTTGAGAGAGCAAGAGGGCTTTATGAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCGGAATTTGAGGCAACGGCTATGGATAACGAGAGTTTAGACTTAACAGAACATGAACAAAAGAAGCAATGCATTCAGCGCGCTAGAAGGGTGTTTGAGGAAGCTCTTAACTACTACAGATCATCAGCTCCAGATTTGAAGGAAGAAAGGGCAATGCTATTGGAGAAATGGCTCAAAATGGAGGCTTCATCTGGGGATCTTGGAGATGTTAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGACGGCAAGTCGCCACCGAAGATGGTTCTGCTAGAATTGAAGAATTCATCGACTATTTATTCCCCGAGGAAACTCAGACAACCAATCTCAAGATATTGGAAGCTGCTTACAAATGGAAGAAGCAAAAATTGTCTTCTGATGATGATTAA 2091 0.4409 MSSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDATELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEIERARGIFERFVQCHPKVGAWIRYAKFEMKNGEVAKSRNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYRECLNQIPHHKFSFAKIWLLAAQFEIRQLNLKAARQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKLYEKYLEWTPENCYAWSKYAELERSLSETERARAIFEVAIAQPALDMPELLWKAYIDFETDEGEFERARGLYERLLDRTKHLKVWISYAEFEATAMDNESLDLTEHEQKKQCIQRARRVFEEALNYYRSSAPDLKEERAMLLEKWLKMEASSGDLGDVSLVQSKLPKKLKKRRQVATEDGSARIEEFIDYLFPEETQTTNLKILEAAYKWKKQKLSSDDD* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02241 696 Gene3D Tetratricopeptide repeat domain 322 522 IPR011990 GO:0005515
Rops1g02241 696 Gene3D Tetratricopeptide repeat domain 523 608 IPR011990 GO:0005515
Rops1g02241 696 Gene3D Tetratricopeptide repeat domain 122 321 IPR011990 GO:0005515
Rops1g02241 696 SUPERFAMILY TPR-like 264 523 IPR011990 GO:0005515
Rops1g02241 696 SUPERFAMILY TPR-like 194 263 IPR011990 GO:0005515
Rops1g02241 696 FunFam Cell cycle control protein 121 325 - -
Rops1g02241 696 FunFam Crooked neck pre-mRNA-splicing factor 1 329 481 - -
Rops1g02241 696 PANTHER PRE-MRNA SPLICING FACTOR 24 690 IPR045075 GO:0000398
Rops1g02241 696 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Rops1g02241 696 SUPERFAMILY TPR-like 526 630 IPR011990 GO:0005515
Rops1g02241 696 SUPERFAMILY TPR-like 81 203 IPR011990 GO:0005515
Rops1g02241 696 MobiDBLite consensus disorder prediction 11 27 - -
Rops1g02241 696 FunFam Cell cycle control protein cwf4 482 678 - -
Rops1g02241 696 SMART hat_new_1 539 570 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 206 237 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 320 352 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 71 103 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 503 537 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 105 137 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 436 467 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 469 501 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 398 434 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 173 204 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 239 274 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 354 388 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 139 171 IPR003107 GO:0006396
Rops1g02241 696 SMART hat_new_1 276 310 IPR003107 GO:0006396
Rops1g02241 696 MobiDBLite consensus disorder prediction 1 35 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02241 K12869 - gmx:100791616 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02241 1 44362187 44369311 Rops1g02241 1 44362187 44369311 ECH