Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02228 ATGCAGTTACAGTCACAAAGCTTGCTACTCCCTTCGTTTCCCAAACCATTGGCCTCTTTTACTCTCCCTTTCCGTTCTAAGACTCTGCAATCTTCAACTTTCATCAGGGCACCAATCTCCTCTTCCATTTTCCGAAATGAAAATGAAACCAAATTGCGAATGCTCCTTTCCATCCCACGTTTTGAAGTTGATAATAATAATAATAATAAGCCGCGTGGGGGTACAGGGGAGGAGGGACTCAACCGTGTTTACAAGAATCGCTGCGCTGAGTCAGATGCTAACAGTGACAACTCCAACTCCAACTCCTCCCTAATTGTTTCTTCTGCCGGTGATAATGGATCCATGGAACTTTTGAAGTTTATGTTGTTCTTTGCGTTCCTCACACTTCAAGATTCTTCTCCAGCAGCTGCTTCTGACATTGCCACTAGTTTTAATTCATTTCCTATCTTTGGGGACATCGGTGACATAAGCACAGGTTTTGCTTCAGCGTTTCTGCTAATATTCTTCTCTGAACTGGGAGACAAGACCTTTTTCATTGCAGCATTGTTAGCAGCAAGGAATTCAGCTGTTGTTGTTTTCATTGGGACATTTGGTGCGCTTGCGGCAATGACTCTTATATCTGTTGTTCTTGGACGAACTTTTCATTATGTTGATGAACTCTTGCCATTCAGATTTGGGGAAACTGATTTACCAGTTGATGACATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCGTCTAGTGATGGTGAAAAATCAGATGATGAGCAGAAGGAGGCAGAGCTAGCAGTTTCAGAATTTTCTGGAAATGGAGCTGGGATACTAGCTGCTGCTAGCACTGTTGTCAGCACTTTTCTCTTAGTTTTTGTTGCTGAATGGGGTGATAAATCATTTTTCTCTACAATAGCCCTTGCAGCAGCTTCTTCACCTCTTGGAGTCATAGCTGGATCACTTGCCGGTCATGGTGTTGCAACTTTGCTAGCTGTACTTGGAGGCTCTTTACTGGGGACATTTTTGTCAGAGAAGGTTATTGCCTACATCGGAGGTGTTCTCTTTCTTGTCTTTGCTGCAGTAACCTTATTTGAAATTGTGCAATAG 1119 0.4334 MQLQSQSLLLPSFPKPLASFTLPFRSKTLQSSTFIRAPISSSIFRNENETKLRMLLSIPRFEVDNNNNNKPRGGTGEEGLNRVYKNRCAESDANSDNSNSNSSLIVSSAGDNGSMELLKFMLFFAFLTLQDSSPAAASDIATSFNSFPIFGDIGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAVVVFIGTFGALAAMTLISVVLGRTFHYVDELLPFRFGETDLPVDDIAAVCLLVYFGVSTLLDASSSDGEKSDDEQKEAELAVSEFSGNGAGILAAASTVVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTLFEIVQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02228 372 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 155 368 IPR001727 -
Rops1g02228 372 ProSitePatterns Uncharacterized protein family UPF0016 signature. 171 180 IPR001727 -
Rops1g02228 372 Pfam Uncharacterized protein family UPF0016 290 363 IPR001727 -
Rops1g02228 372 Pfam Uncharacterized protein family UPF0016 162 245 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02228 Rops-Chr1 44155404 44159870 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02228 - - pcin:129322791 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02228 1 44155404 44159870 Rops1g02228 1 44155404 44159870 ECH