Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02227 ATGAATGGGAAAATGGAGAGCATTAAAATCAATATTCCTACAACTACTAAACCTGAGATGCCTGAGACTGGCACGAAATCTGAAACCAGCAGCACTCTCTCGTGCAAAGCTTGGCTTCAGATTCAGAGGGTATGCGATTTTTGCAAGGAAGACAGTGGCAGAGTAATATTTGCATTCAAAGTGGGACTAGCTGTTCTTCTTGTGTCTTTATTGAGACTATTTGAAGCCCCATACCGAGTCTTTGGACCCAATATTGTATGGGCCATTGTCACTTGTGTCCTAGTCTTCGAATACACTGTTGGAGCAACATTTAATCGAGGATTTAATCGAGGACTGGGAAGCTTGCTGGCGGGAATCTTGGCCATTGCTGTTGCTCAGACAGCGCTGTCCAGTGGCCATGTTGCTGAGCCTATTATTATTGGCCTTAGTATCTTCGTGATCGGGGCTATAACGTCGTTTATGAAAATGTGGCCATCGCTTGTGCAGTACGAGTATGGGTTCAGCGTCACACTGCAAATCTACTGCTTGATCATAGTCTCTGGCTATAGAATGGGTAACCCAATTAGAACTATGATCGATCGGGTGTATACAATTGCCATTGGAGGATTAATATCAATCTTGGTGAATGTCACTATTTTTCCTGTATGGGCTGGGGAGCAGTTACATCAAGAGCTGGTTAAGAACTTCGATTCAGTGGCAGATTCACTTGATGAATGTGTTAAGAAATATTTAGACGAGAGATCAGAGAAGTCTAAATTCACCACAGCTGGCATAGATGAATTTGCTGAGGAACCAGCTTATAAAAGATGTCAAAGCACCTTAAATTCAGGGACAAAGCTTGAGACTCTGGCTGATTCAGCAAAATGGGAGCCACCACATGGTAGATTCCTGCACTTTTTATATCCATGGTCACAATATGTTGAAGTTGGGGCAGTGTTGCGACACTGTGCTTATGAAGTTATGGCACTCCATAGTATTGTACACTCCGAAATTAAGGCACCTTACAACCTGCGGGTTGCATTCAGGTCAGAAATCCAAGAGGTGTCAAACCAAGCTGCAGATCTAGTAAGGATTCTAGGAAGAGACATTAGCAACATGAAGTGGAGTCTTAAAAACTCCCACATTAAGAAGGTTCACAGCTCTACAGAGAAGCTGCAACGTTCCATGCACCTCCGTTCTTCTCTACTCATAGCTACTTTTGAATCCCCCTCCAAGCCCCTTTTGAAGCTCTCTCATACCCTTCTATCATCCACCACCCTTTACCACTCACCTGATCAAAAGGGAATGGTTGAGCTTAAGTACCCACAAAAGAACTCAAACCCACTAGCTCAAAACATTCCAAAAGGGATAATGCCAATGCCACCAGAACAAACGATGAGGAAGCAGTTGAGAAGACAATATTCTTGGCCATCAAGAGAAGTGAAGTGGGTAACCTTTGAAGAAGATAATGAAACAACAGCAGAGTTGTTGTTACCTAGGATGAGGGCCTTAGAGAGTACCGCTGCACTGTCATTGTCATTGGCCAACTTCACTTCCTCGCTCGTCGAGTTTGTGGCGAGAGTTGACCACTTGATAGAGGCAGTTGATAAGCTTTCGAAGATGGCCATGTTCAAGATTGACGAGTTGTAG 1629 0.4383 MNGKMESIKINIPTTTKPEMPETGTKSETSSTLSCKAWLQIQRVCDFCKEDSGRVIFAFKVGLAVLLVSLLRLFEAPYRVFGPNIVWAIVTCVLVFEYTVGATFNRGFNRGLGSLLAGILAIAVAQTALSSGHVAEPIIIGLSIFVIGAITSFMKMWPSLVQYEYGFSVTLQIYCLIIVSGYRMGNPIRTMIDRVYTIAIGGLISILVNVTIFPVWAGEQLHQELVKNFDSVADSLDECVKKYLDERSEKSKFTTAGIDEFAEEPAYKRCQSTLNSGTKLETLADSAKWEPPHGRFLHFLYPWSQYVEVGAVLRHCAYEVMALHSIVHSEIKAPYNLRVAFRSEIQEVSNQAADLVRILGRDISNMKWSLKNSHIKKVHSSTEKLQRSMHLRSSLLIATFESPSKPLLKLSHTLLSSTTLYHSPDQKGMVELKYPQKNSNPLAQNIPKGIMPMPPEQTMRKQLRRQYSWPSREVKWVTFEEDNETTAELLLPRMRALESTAALSLSLANFTSSLVEFVARVDHLIEAVDKLSKMAMFKIDEL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02227 542 Pfam Aluminium activated malate transporter 46 532 IPR020966 GO:0015743
Rops1g02227 542 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 39 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02227 Rops-Chr1 44147914 44152004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02227 51 542 Miscellaneous Gene Families AT3G18440 38.178 4.97e-102 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02227 K25841 - gmx:102668657 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02227 1 44147914 44152004 Rops1g02227 1 44147914 44152004 ECH