Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02218 ATGAGGATGTTTCCTAAGTTCAAATCCTTGTCAAGAGCAGTGCACGAGGAACAAGAGCATGAACATGAGGAGAAAAACAGGTACCCTATGATTAGAAGTGAAGGAAGCTTGTGCACATCCCTGACAGTTTGGAGAAAATCCCTATTGATGAGTTGTAATGGATTCACGGTGATAGATTCTAATGGTGATCTGGTTTATCGGGTTGACAATTATATTGGGCACCCAAACCAACTCATTCTCATGGATGCTTCAGGAAAATCTATCCTCACCATGTGCCGCCGCAGGAGGCTTGGATTGTTAGAAAGCTGGTTTGTGTATGAAGGTGAAGTGCAGAACCAGCGTACGAGGAGGAGTAAATTTTCTACGTCATCAGAGAGTCCAATTTGTTGTGTAAAGAAGCATGTGAATATTTTAAATGGCGGCAACCCCGACGTTCAGGCGTACGTGTACCGTGGAGCCTCATGTTCTGATAAACGGTGTGTGGCGTTTACTATAGAGGGTTCCTATGCAAATCGAACATGTAAGGTTTTGGATGAGTGCAGAAGGGTCGTAGCTGAGATTAAGAGGAAGGAACCCAATACAAAAAACGTCTCTTTTGGGATAGAGATTTTTCAGTTAATTGTGTACCCTGGCTTTGATCCTGGCTTTGCCATGGCACTCGTCTTGCTCCTCGATCAAATGTATCCGTAA 690 0.4391 MRMFPKFKSLSRAVHEEQEHEHEEKNRYPMIRSEGSLCTSLTVWRKSLLMSCNGFTVIDSNGDLVYRVDNYIGHPNQLILMDASGKSILTMCRRRRLGLLESWFVYEGEVQNQRTRRSKFSTSSESPICCVKKHVNILNGGNPDVQAYVYRGASCSDKRCVAFTIEGSYANRTCKVLDECRRVVAEIKRKEPNTKNVSFGIEIFQLIVYPGFDPGFAMALVLLLDQMYP* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02218 229 Gene3D - 36 229 IPR038595 -
Rops1g02218 229 Pfam LURP-one-related 38 222 IPR007612 -
Rops1g02218 229 SUPERFAMILY Tubby C-terminal domain-like 37 228 IPR025659 -
Rops1g02218 229 PANTHER - 38 228 IPR007612 -
Rops1g02218 229 MobiDBLite consensus disorder prediction 1 27 - -
Rops1g02218 229 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02218 Rops-Chr1 43883642 43884753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02218 - - gmx:100779188 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02218 1 43883642 43884753 Rops1g02218 1 43883642 43884753 ECH
Rops1g02218 1 43883642 43884753 Rops2g00503 2 7351669 7352922 PCT