Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02215 ATGAGCACTTCGTCGGCGTGGGCACTGCCACCAGATTCAGGGTTGTTGAGTAGAAATGAAAACCCATCGGCCATCAACTCTTATAGAATCAGAGCAGTTCTGGAGCGTATAGCTTTGCATGTTCAAGGTGCCCTAACCGACTATAAGGAATTTAGTAACCTCTGCCTCTCCCTCTCTCGTGGTATTGATTATGCACTTGCCAATGGTGATATTCCAGAACAAGCTCAAGTTCTGCCTGTATTGATGAAACAGGTGATTTCCATGATGTGTCAACGAAAGAATGATGAATTGTCACAAGCATTTATAATGGTTTTGATGATCTCTATAAAGAATGCCTGTAAAATTGGATGGTTCCCGACGAAAGAGTCAGAAGAACTTATTACTATTGCTGATGAGATAGGAAAGATCTACTGCCGCATGGAGAATGTAAATGCTGGACCTAGGTCTTACGTTTCTTACGTTTCTACAATATCAACAGTAATGGAAAGGTTCTATCCAAAACAAAAATTGGGTCCAATACTTGTGTCAATTGAAGCCAAGCCTGGATATGGAGCTTTTGCTTCTGACTTTCATATTACAAAGAGTAATGTTTTACCAGATAAAATTTGGTTATTGGTGGCACAAACTGATAACATTGAGACATCTGCATGCCTCATCAGTCCTCAGCAAGTGAATTTTCTCCTGAATGGAAAAGGAGTGGACAAAAGGACTAATGTTCAAATGGAAACTGGACCGCAGTTGCCAACTAATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGCCATTATGTTATACTCGTTACCTATATGAGTGCTAAATCTTTGCCCGAGCATCCAGTTCTTCAAGATTATGTTCAGCCTGCTGTTACTTCTGTTGATTCAGATATTATCGAGGGGCCATCACAAATATCACTTAATTGTCCCATAAGCTTTACACGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGATTTTGACAACTTCATTGATATAAATTCAAGGAGACCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGCTATGAAGATATTCGTCTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTAAGAACATTGTGGAAGTTATTGTCCTTGCTGATGGATCGTGGAAGGCAGTCTTGGAGACTGATCATGATGTGGATAAGATACAGAACAAGGCCCGCAATGGTGAAAAGGAACAGACTGAACCACAAGAATCATCCTTGTCACCTAGTACTGTGTCCAATATTTTGGACCTCACCATTGACAATGTTCATTTGGAGATAATGGACACTTGTGAAACGGCAGATAGAAAACCTTTCCAGGCATCTGTTCCAAGTCAATTTGTCAACCCAAATTCAACTTCCTTGGTTATGAACTCTACCAGTGTTGATCAAAATGTTGCTGCTCAAATAGAAGATGACTTTTGGTCTGGAGTTCATATTGCTCGTGGTAGGTCTGATACCCCAACAGTTGCTGTCTCTGAGCATCCTGTTCTGCCTGATACTTCTCCTGCATTTAATCAGGAAGCTGTGGGTCATGAGAATAACCCTGCCATGCATAATCAATTTTCTGCACCAAATAATTTTCAGCTGCAGTTAAATTATAATTCACCTGTTAGCGAGTATGGGAGGTCATCCTCAATACCAAGGCATATTAATAGGACTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATTGGGACCAAGCCCACAGCAAAATTCAGTAACTAATTTGAATTCCTTGCTAGCAAGCAGTTCCTCGGCTGCTCCTCACGTTTCTTTGTCCAATCCAGCCTCTGCAGATGCTTTCAATGCCATACTGAGTGATACAGAAAGACAGCAACATTTTTCTCGATCCCCACTGAATCTGCCTCAGGTCTCTGGTGTAAATTCATCTGCATTGCAGCATCACTCAGCAACACAGAACCGAGTGCCACCAGTTAATATTTCAGCACCAACTCAATTTCAAAACCCATACAGAGCATCTAATTTCTTGAATGAATTGAGAAATCCACACTTAATGCAAGCTCTGGGTCCCCGACCACTCCAACCAATGCGACCATCACATACCCAACGGTCCCATATCCAGCAAGGTGGTTCACAAGCTGGGCTTGTTCAGGCAGCTGGAGCTACTGCAAATAGCCAACAAGCCAGGGTTATGGCTTCTGCCCAGGTTGCCAGACAAGGTAGTCCTCAAGCTGGGATTGTTCAGACAGCTGGAGCTACTGCTAATAGCCAACAAACTAGGGTTATGGCTACTGCCCAGGCTGCCAGACAGTCACATCCCACTTCAGTTCAAAATCAAACTTCCCTAGCAGCCACATCTTTTACAGCTGACAGTCTCCGGGGGCTGACAGGAGAGCTAAGAGGAAATCTGGGAGGAACAGTACAGTCAGTTTCTAGGCCTGATGAGTTATTCAGTTCACAACCAGATCAGAATTGGCGTCCAACGACACGAATGCGTGGAAGTCTTGCTGGTCGGCAGTATCCTGACGCTGTTAGGCAGCGAATAATTGCTCCAACACAACCAGTTCAAAGTACAAGTTCAAGCCCACTAGGTCCACAACCAGTTCAAAGTTCAAGTTCAAGACCACAAGGTCCCCAACCAGTCCGACCAACCGGTGCGACATCCCCACTGGATGTGCTTATCGCAAACAATAGAAATGCCCATAATTATTCTTCGAGTACTTAA 2757 0.436 MSTSSAWALPPDSGLLSRNENPSAINSYRIRAVLERIALHVQGALTDYKEFSNLCLSLSRGIDYALANGDIPEQAQVLPVLMKQVISMMCQRKNDELSQAFIMVLMISIKNACKIGWFPTKESEELITIADEIGKIYCRMENVNAGPRSYVSYVSTISTVMERFYPKQKLGPILVSIEAKPGYGAFASDFHITKSNVLPDKIWLLVAQTDNIETSACLISPQQVNFLLNGKGVDKRTNVQMETGPQLPTNVTGMLKFGTNLLQAVGQFNGHYVILVTYMSAKSLPEHPVLQDYVQPAVTSVDSDIIEGPSQISLNCPISFTRIKTPVKGHSCKHFQCFDFDNFIDINSRRPSWRCPHCNQYVCYEDIRLDRNMVEILKNVGKNIVEVIVLADGSWKAVLETDHDVDKIQNKARNGEKEQTEPQESSLSPSTVSNILDLTIDNVHLEIMDTCETADRKPFQASVPSQFVNPNSTSLVMNSTSVDQNVAAQIEDDFWSGVHIARGRSDTPTVAVSEHPVLPDTSPAFNQEAVGHENNPAMHNQFSAPNNFQLQLNYNSPVSEYGRSSSIPRHINRTPVAVQALPVQSQALGPSPQQNSVTNLNSLLASSSSAAPHVSLSNPASADAFNAILSDTERQQHFSRSPLNLPQVSGVNSSALQHHSATQNRVPPVNISAPTQFQNPYRASNFLNELRNPHLMQALGPRPLQPMRPSHTQRSHIQQGGSQAGLVQAAGATANSQQARVMASAQVARQGSPQAGIVQTAGATANSQQTRVMATAQAARQSHPTSVQNQTSLAATSFTADSLRGLTGELRGNLGGTVQSVSRPDELFSSQPDQNWRPTTRMRGSLAGRQYPDAVRQRIIAPTQPVQSTSSSPLGPQPVQSSSSRPQGPQPVRPTGATSPLDVLIANNRNAHNYSSST* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02215 918 SUPERFAMILY RING/U-box 312 387 - -
Rops1g02215 918 Pfam MIZ/SP-RING zinc finger 312 360 IPR004181 GO:0008270
Rops1g02215 918 MobiDBLite consensus disorder prediction 412 431 - -
Rops1g02215 918 MobiDBLite consensus disorder prediction 813 841 - -
Rops1g02215 918 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 34 616 - -
Rops1g02215 918 CDD SP-RING_PIAS-like 313 360 - -
Rops1g02215 918 MobiDBLite consensus disorder prediction 862 918 - -
Rops1g02215 918 MobiDBLite consensus disorder prediction 901 918 - -
Rops1g02215 918 ProSiteProfiles Zinc finger SP-RING-type profile. 301 382 IPR004181 GO:0008270
Rops1g02215 918 MobiDBLite consensus disorder prediction 862 894 - -
Rops1g02215 918 MobiDBLite consensus disorder prediction 636 669 - -
Rops1g02215 918 MobiDBLite consensus disorder prediction 810 845 - -
Rops1g02215 918 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 398 IPR013083 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02215 K04706 - gmx:100780539 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02215 1 43853699 43865901 Rops1g02215 1 43853699 43865901 ECH