Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02200 ATGGCTGCGCTACCTTTCCCATACGCACTATCCCTCTCTCCATCTCTCCCACAACCTCAACAAAAACGGCTCAAAATCAGTCTCACTTCAAAGACAAACACATCCTTATTGATCCAATGTTGTCACAACCAAACAGAACACATCAAACTAACCAGCAATGGTGCAGCCAGATTTCCAGAGAAGAATCCTCTCATCAACCCTCGGGCCTCCACCGTGGTGCCTCCAAGACCTCGAAGGATAATCCTGGTTAGGCATGGAGAGAGTGAAGGGAACGTGGATGAGAGTGTATACACAAGGGTGCCTGATCCCAAGATAGGCCTCACTGACAAAGGCAAGGCACAAGCAGAGGAATGTGGCAAAAGGATCAAGAAATTGATTGAGAAAGATGGTCACCAAAATTGGCAACTTTACTTCTATGTGTCCCCATATAGAAGGACCCTTGAAACGTTGAAGAGCCTGGCTCGTCCCTTTGAACGTGAAAGAATTGCTGGCTTCAGAGAAGAGCCTCGCATTCGAGAACAAGATTTTGGGAATTTTCAGAATAGAGAAAAGATGCGACTGGAAAAGGCACTACGCCAGGTTTATGGTCGTTTCTTTTACCGATTTCCAAATGGAGAATCCGCAGCTGATGTTTATGATAGAATCACGGGATTCAGAGAAACACTAAGAGCAGATATTAATATTGGACGGTATCAGCCACCTGGTGAGAAGAAAACAGAAGTGAACTTGGTCATCGTGTCGCACGGTCTAACACTTCGAGTTTTTCTCATGAGGTGGTACAAGTGGACTGTCCAACAGTTCGAGGGTCTCAACAACTTTGGCAACGGAGGCATGCTTGTCATGGAAAAGGGTTATGGTGGAAGGTATAGCTTACTGGGGCATCACGATGAAGAAGAGCTCAGACAGTTTGGATTGACTGATGAAATGCTCATTGATCAGGAGTGGCATAAATTTGCAAAGCCAGCTGATCTGAATTATGATTGTCCAATGGTGAATTCCTTCTTTCCCCATCTCAATGAAGTTACTAGCGTCAGTCAACAAGAAGGGTGA 1050 0.4533 MAALPFPYALSLSPSLPQPQQKRLKISLTSKTNTSLLIQCCHNQTEHIKLTSNGAARFPEKNPLINPRASTVVPPRPRRIILVRHGESEGNVDESVYTRVPDPKIGLTDKGKAQAEECGKRIKKLIEKDGHQNWQLYFYVSPYRRTLETLKSLARPFERERIAGFREEPRIREQDFGNFQNREKMRLEKALRQVYGRFFYRFPNGESAADVYDRITGFRETLRADINIGRYQPPGEKKTEVNLVIVSHGLTLRVFLMRWYKWTVQQFEGLNNFGNGGMLVMEKGYGGRYSLLGHHDEEELRQFGLTDEMLIDQEWHKFAKPADLNYDCPMVNSFFPHLNEVTSVSQQEG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02200 349 Gene3D - 76 310 IPR029033 -
Rops1g02200 349 Pfam Histidine phosphatase superfamily (branch 1) 80 282 IPR013078 -
Rops1g02200 349 SUPERFAMILY Phosphoglycerate mutase-like 77 288 IPR029033 -
Rops1g02200 349 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 82 91 IPR001345 GO:0003824
Rops1g02200 349 SMART PGAM_5 79 255 IPR013078 -
Rops1g02200 349 CDD HP_PGM_like 79 282 IPR013078 -
Rops1g02200 349 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 74 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02200 Rops-Chr1 43625759 43627366 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02200 - - gmx:100800012 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02200 1 43625759 43627366 Rops1g02200 1 43625759 43627366 ECH