Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02188 ATGGATCCAAAATCCGTGCACGATTTTGTTGTTAAGGATGCTAAAGGAGATCTTGTAGATCTCTCCACTTACAAGGGAAAAGTCCTTCTGATTGTCAATGTTGCTTCTAAATGTGGTTTGACCAACTCCAATTATACGGAGCTGAATCAATTAAATGAGAAGTATAAACATGAAGGCCTGGAGATTCTGGCATTTCCATGTAATCAATTTCGGGAGCAAGAACCTGAAAGCAATGATAAAATTGTGGAGTTCGTCTGCACTCGCTTCAAATCAGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCTCTGTATAAATTCTTGAAGTCAGGCAAATGGGGACTTTTGGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTAATACGGATGGGCAAGTGATGGATCGCTATTATCCCACAACTTCTCCTCTCAGCCTTGAGCGAGATATTCGTCAGCTATTGGGTATTTCGTGA 495 0.4081 MDPKSVHDFVVKDAKGDLVDLSTYKGKVLLIVNVASKCGLTNSNYTELNQLNEKYKHEGLEILAFPCNQFREQEPESNDKIVEFVCTRFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGLLGDDIQWNFAKFLVNTDGQVMDRYYPTTSPLSLERDIRQLLGIS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02188 164 Pfam Glutathione peroxidase 6 114 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 CDD GSH_Peroxidase 5 157 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 PRINTS Glutathione peroxidase family signature 60 76 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 PRINTS Glutathione peroxidase family signature 125 134 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 PRINTS Glutathione peroxidase family signature 24 41 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 Gene3D Glutaredoxin 1 164 - -
Rops1g02188 164 ProSitePatterns Glutathione peroxidases signature 2. 63 70 IPR029760 -
Rops1g02188 164 PANTHER GLUTATHIONE PEROXIDASE 3 161 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 ProSiteProfiles Glutathione peroxidase profile. 1 164 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 ProSitePatterns Glutathione peroxidases active site. 26 41 IPR029759 -
Rops1g02188 164 PIRSF Glutathion_perox 1 163 IPR000889 GO:0004602|GO:0006979
Rops1g02188 164 SUPERFAMILY Thioredoxin-like 5 161 IPR036249 -
Rops1g02188 164 FunFam Glutathione peroxidase 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02188 Rops-Chr1 43432952 43434593 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02188 K00432 - gmx:100527034 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02188 1 43432952 43434593 Rops2g00568 2 8276753 8279017 PCT