Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02185 ATGAACAACTTAAAGTTGGGGGTAGATGTGGTTAGTGCTCACAATCTATTACCCAAAGATGGACAAGGTTCTAGTAGTGCCTTTGTGGAACTTTACTTTGACGGCCAAAAGTTCCGTACGACCATCAAAGAAAAGGATCTTAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGATCCTTCTAATCTTCACTATCTCACTCTTGAGGTCTATGTCCACGGCCATGCCAAAGCTACTAACTCGAGTTCATTTCTTGGCAAGGTTAGCCTCACTGGAACTTCTTTTGTCCCTTACCCTGATGCAGTTGTCTTGCACTATCCATTGGAAAAGCGTGGTATTTTCTCTCGTGTAAGAGGAGAGATTGGCCTTAAAGTTTACATTACTGATAACCCAACCATCAAATCCTCAATTCCAACTCCTGCTGTTGAGTCTATTCCAACAAATAATCCCAGCTCAGCACATGCAGAAGTTCATGCACCTGCAACCACAATGACCAACGGTTTGTCTCATGAAAAGGTTGAATCAAGACACACGTTTCATCATCTCCCTAACACAAATCATCACCATCACCAACACCATTCCGCTGTCTTTGCAGATACTCATTATGTAACAAAGTACGAAGCTGATGAAATGAAATCTGAACCACAACCTATGAAGTTAGTACGCATGCACTCTGCTGCGTCAGCACAACCAGTTGATTATGCACTTAAAGAAACAAGCCCATTTCTTGGTGGGGGAAGAGTTGTTGGGGGCCGTCTTATTCATAAAGACAAGACTGCAAGTACATATGATCTTGTGGAAAGGATGTATTTTCTGTATGTTAGGGTTGTTAAGGCTCGTGAGCTTCCCACTATGGATATTACTGGGAGTCTTGATCCATTTGTTGAGGTGAGAATTGGAAATTACAGAGGTATTACTAGACACTTTGACAAGAATCAGAATCCTGAGTGGAATCAGGTGTTTGCCTTTTCAAAGGACCGGATGCAAGCATCTGTTCTAGAAGTTGTGATCAAGGACAAGGATATCATCAAGGATGATTTTGTAGGCATTGTGAGGTTTGACATCAATGAGGTTCCTTTGAGAGTACCACCAGATAGCCCTTTGGCACCAGAGTGGTACCGACTTGGGGATAAGAAAGGGGAGAAGGTTAAAGGTGAGTTGATGCTTGCTGTCTGGATTGGTACTCAAGCAGATGAGGCATTTTCTGATGCATGGCATTCAGATGCAGCCGCACCTGTTGACAGCACTGCTACTACCTCCACAGTTATACGGTCAAAGGTGTATCATGCACCAAGGTTGTGGTATGTGCGTGTCAATGTGGTAGAGGCACAAGACTTGGTTCCTACCGAGAAAAATCGTTTTCCAGATGTGTATTGCAAGGTGCAGATAGGAAACCAAGTGCTGAAAACAAAGACAGTTCCAGCCAGAACTCTAAACCCACTCTGGAATGAGGACCTTTTGTTTGTTGCTGCTGAACCTTTTGAAGATCATATAGTCCTTTCAGTTGAAGATCGGGTAAGTCCTGGAAAAGATGAGATCATTGGGAGGGTCATCATACCACTAAACTCTGTGGATAGGCGTGCTGATGATAGAATCATTCATTCTCGATGGTTCAACCTGGAAAAGCCAGTTGCTGTGGATGTTGATCAGCTGAAGAAAGAAAAGTTCTCCAGCAAAATTCAGCTCCGTCTATGTCTAGATGGAGGATATCATGTTCATGATGAGTCAACTCATTACAGTAGTGATCTCCGCCCCACAGCAAAACAGCTATGGAAGCCACCAATTGGGGTGTTAGAACTTGGAGTGCTGAATGCCATAGGACTCCACCCCATGAAAACACGAGATAACAGGGGCACTTCAGACACATACTGTGTAGCAAAATATGGTCACAAATGGGTCAGAACACGGACCATTGTTGATAATCTGTCTCCAAAATACAATGAGCAATACACTTGGGAGGTGTTTGATCAGGCCACAGTCCTCACAGTAGGTGTCTTTGACAACGGCCAGATAGGGGAAAAGGGTAATGGTTCGAAAGACTTGAAAATTGGGAAGGTCAGAATTCGCATCTCAACTTTGGAAGCAGGCAGAATTTACACTCACTCATATCCATTGCTGGTTCTTCACCCAACTGGGGTCAAGAAAATGGGTGAACTGCACTTGGCAATAAGGTTCTCATGCACTAGTTTTGCAAACATGCTTTACCTATACTCACGACCACTGCTACCAAAAATGCACTACGTAAGGCCTTTTGCAGTCATGCAGCTAGACATGCTACGTCACCAAGCAGTCAACATAGTAGCCGCACGACTTGGCAGAGCTGAGCCTCCACTTCGGAAGGAAGTGGTGGAGTACATGTCAGATGTGGACTCACACCTCTGGAGTATGCGTCGAAGCAAGGCTAATTTCTTCAGGCTGATGACAGTCTTTTCTGGTGTGTTTGCAGTTGGGAAGTGGTTCAGTGATATCTGCATGTGGATAAATCCTATTACAACAGTGCTGGTTCATGTGCTGTTCCTCATGCTAGTTTGCTTCCCAGAATTGATTTTGCCCACTTTTTTTCTCTACCTGTTCTTGATAGGAGTATGGAACTTCAGGTACAGACCCAGGTACCCTCCTCACATGAACACAAGAATCTCACAAGCTGATGCAGTGCACCCGGATGAGTTGGATGAGGAGTTTGACACATTCCCCACAAGCAAAAGTCCTGACCTTGTGAGAATGAGGTATGATCGTTTGAGGAGTGTAGCTGGAAGAATACAAACAGTGGTAGGTGATTTGGCTAGCCAGGGGGAGAGGATTCAAGCACTTTTAAGCTGGAGAGACCCTCGTGCTACTGCCATCTTCATTACTTTCTGTCTCCTTTCTGCTTTGTTTCTCTATGTTACTCCTTTTCAAGTGGTGGCAGGGTTCGCAAGCTTCTATGTCATGAGGCATCCAAGATTTCGCCACAGGCTCCCATCTGCCCCTATCAACTTCTTCCGCCGCCTGCCTGCAAGAACAGACAGTATGTTGTAG 3024 0.4461 MNNLKLGVDVVSAHNLLPKDGQGSSSAFVELYFDGQKFRTTIKEKDLNPVWNESFYFNISDPSNLHYLTLEVYVHGHAKATNSSSFLGKVSLTGTSFVPYPDAVVLHYPLEKRGIFSRVRGEIGLKVYITDNPTIKSSIPTPAVESIPTNNPSSAHAEVHAPATTMTNGLSHEKVESRHTFHHLPNTNHHHHQHHSAVFADTHYVTKYEADEMKSEPQPMKLVRMHSAASAQPVDYALKETSPFLGGGRVVGGRLIHKDKTASTYDLVERMYFLYVRVVKARELPTMDITGSLDPFVEVRIGNYRGITRHFDKNQNPEWNQVFAFSKDRMQASVLEVVIKDKDIIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLGDKKGEKVKGELMLAVWIGTQADEAFSDAWHSDAAAPVDSTATTSTVIRSKVYHAPRLWYVRVNVVEAQDLVPTEKNRFPDVYCKVQIGNQVLKTKTVPARTLNPLWNEDLLFVAAEPFEDHIVLSVEDRVSPGKDEIIGRVIIPLNSVDRRADDRIIHSRWFNLEKPVAVDVDQLKKEKFSSKIQLRLCLDGGYHVHDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAIGLHPMKTRDNRGTSDTYCVAKYGHKWVRTRTIVDNLSPKYNEQYTWEVFDQATVLTVGVFDNGQIGEKGNGSKDLKIGKVRIRISTLEAGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFANMLYLYSRPLLPKMHYVRPFAVMQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGVFAVGKWFSDICMWINPITTVLVHVLFLMLVCFPELILPTFFLYLFLIGVWNFRYRPRYPPHMNTRISQADAVHPDELDEEFDTFPTSKSPDLVRMRYDRLRSVAGRIQTVVGDLASQGERIQALLSWRDPRATAIFITFCLLSALFLYVTPFQVVAGFASFYVMRHPRFRHRLPSAPINFFRRLPARTDSML* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02185 1007 FunFam C2 domain-containing protein 423 568 - -
Rops1g02185 1007 FunFam C2 domain-containing protein 581 731 - -
Rops1g02185 1007 ProSiteProfiles C2 domain profile. 581 705 IPR000008 -
Rops1g02185 1007 CDD C2A_MCTP_PRT_plant 5 131 - -
Rops1g02185 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 436 589 IPR035892 -
Rops1g02185 1007 Gene3D C2 domain 1 130 IPR035892 -
Rops1g02185 1007 Gene3D C2 domain 582 729 IPR035892 -
Rops1g02185 1007 Gene3D C2 domain 419 568 IPR035892 -
Rops1g02185 1007 Gene3D C2 domain 255 395 IPR035892 -
Rops1g02185 1007 Pfam C2 domain 436 541 IPR000008 -
Rops1g02185 1007 Pfam C2 domain 5 93 IPR000008 -
Rops1g02185 1007 Pfam C2 domain 599 707 IPR000008 -
Rops1g02185 1007 Pfam C2 domain 274 368 IPR000008 -
Rops1g02185 1007 ProSiteProfiles C2 domain profile. 255 375 IPR000008 -
Rops1g02185 1007 Pfam Plant phosphoribosyltransferase C-terminal 852 1007 IPR013583 -
Rops1g02185 1007 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 5 1007 IPR047259 -
Rops1g02185 1007 SMART C2_3c 273 369 IPR000008 -
Rops1g02185 1007 SMART C2_3c 437 535 IPR000008 -
Rops1g02185 1007 SMART C2_3c 5 106 IPR000008 -
Rops1g02185 1007 SMART C2_3c 599 704 IPR000008 -
Rops1g02185 1007 FunFam C2 domain-containing protein 268 412 - -
Rops1g02185 1007 CDD C2C_MCTP_PRT_plant 437 587 IPR047258 -
Rops1g02185 1007 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Rops1g02185 1007 CDD C2B_MCTP_PRT_plant 273 397 IPR047257 -
Rops1g02185 1007 FunFam C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 2 129 - -
Rops1g02185 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 272 411 IPR035892 -
Rops1g02185 1007 ProSiteProfiles C2 domain profile. 416 540 IPR000008 -
Rops1g02185 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 598 735 IPR035892 -
Rops1g02185 1007 CDD C2D_MCTP_PRT_plant 599 724 IPR047255 -
Rops1g02185 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 141 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02185 Rops-Chr1 43417502 43420525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02185 165 1007 Lipid Metabolism Gene Families AT4G11610 77.093 0.0 1400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02185 - - gmx:100777951 1814.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02185 1 43417502 43420525 Rops1g02185 1 43417502 43420525 ECH