LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g02178	ATGTTTCGTTCTGGAAGATGGAGGAGCGAGAGGAACAGAGTCAAAGCTGTTTTCAAGCTGCACTTTCATGCCACCCAGGTGTTACAATATGGGATGGATGCATTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAACCAACTACGACATTAGAGAAAGCTACAGTTCGAGGTGGAAAGTGTAGATGGGAGAATCCGGTATACGAAACAGTCAAATTTATTCAGGAGCCCAAGACTGGGAAAATCAGTGACAAAATATATCATTTTTGGCTCTCAATGGGGTTATCAAAAGCGAGCTCCATTGGGGAGGTTTCTATAAACTTTGCTGATTATGTGGATGCCACAAAGCCCTCCTCTGTCTCTCTTCCCATCAGAAATTCTCATTGTGATGCTGTTTTGCATGTATCTATCCAGAGGCTGCAAGAGAACAGTGATCAAAGAGAGGAAGATGAATATGAAGATGCGAAACTAAAATCCGATGATAGGAACGCAAGGAACCAATTAAGCAATGGCGATACAGATGAAAGCATCAGAAGTTATTCTTCTGAAGATGTTTCTTCCAAAGCAATCATCAATGGGACGTCTAGTGGATCTGACATTACATTGTCAAGTTCTGATGACAGCTCTGGACTTGATACTCCCCGCGAAATTGGACCAAGAAAAATGAACATCCATTCCACCACAAATCAGTTGGTTTCAGTTATGCGCCACGCTTCAGAATCTCAAAACCTTGCTGTCAATGCCTCAACATCAATGCATCAGATATCACACAGGGACTGGTCAGCTGGTTCAGAGCTTGGGTTAAGTATAAGCGATTCAACAAATGATTCTTCCAATGCCCTTTCAAAGGAAAGGTCCCAAGAGGCATCTCCTTTGGAGATTGAGAGACTCAAGGCTGAACTTGATGCTTTGGCCAGGCAGGTGGATGTGTCAGACTTGGAACTACAGACCCTTAGGAAGCAAATTGTGAAGGAAAGCAAAAGAGGGCAGGAGCTCACCAAGGAAGTTATTATCTTGAAAGAGGAAAAGGAAGCACTCAGGATTGAATGTGATAATCTCAGGTCTTTCCACAAACGCATGGATGAGGCCAAAGTGAGAAACAGGTCAAGAATGGAAGGTGGAGATCTTCGTGCTTTTGTTGAAGAAATTAGACAGGAATTGGATTATGAAAAGGACCTGAATGCAAACCTCCGATTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTGGTTCTTGCTGTGCAGGACTTGGAAGAAATGTTGGAGCAGAAAAATAAGGATATATGTAATCATTCCAATAAATACGAACAGGGTAAAAATTCCCCAGATAATGATGAAGAACAGAAAGCCTTGGATGAGCTTGTTAAGGAGCACAACGATGCCAAGGAGACAACACACTTACTTGAGAAAAAAATAATTGATCTCTACAGTGAAATAGAAACGTATAGGAGGGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTGGACTATGAGATATTGAAACAGGAAAACCACAGCATTGCACATAAGCTGGAGCAAAGCCAACTGCAGGAACAGTTAAAAATGCACTGTGAATGTTCATATCCTCCTGCTGCTATGAATGACATTGAAAACCACATTGAGAATCTGGAAAATCAACTCAAGGAACAGTCAGAAGAGTTCTCAAATTCTCTAGCTACCATTAAGGAGCTAGAAACTCATATCAGAAGATTAGAGGAGGAACTGGAGAAACAAGCACAAGGATTTGAAGCTGATATAGAAGCAGTGACACGTGACAAAGTTGAGCAAGAGCAAAGAGCCATCCAAGCAGAAGAAGCTTTGCGAAAGACCAGACTAAAAAATGCTAATACTGCTGAGAGGCTTCAAGAGGAATTTCGAAGGCTCTCAATGCAAATGACCTCTACATTTGATGAAAATGAGAAGGCTGCCATGAGAGCATTGACAGAAGCAAGTGAACTGCGTGTACAGAAAAGTCTGCTGGAAGAAAAGCTGCATAAAGTCAAAGAAGAGCTTCATTCAACTAAAGCTGATTCTGAGGTAAAACTGAATGAACTTTCTAACCAAATAGATACTATGACAGTTCAGATAGAACAGATGTTGTTGGAAATTGAGGACAAGTCCAAGCAGCTTGAAAATCAGAAGCAGCATGGGGAACAGGTTAGTAGGGATTTCTCTGAGGAGATTGGGATGCTAAAAGCTGAGAATGAAAAGCTTAAAGTGGAGATTTCAAGCTTATGTGAAGAAGTAGAAGGAAAAGAAAATTTTAGAACTGACTTGGAACTAATGAAGAAATCAATTGAGGAATCTGAGACACTGCTCCAGAAAGGAACTGTGGAAAGAAATGAACTTGTGAGTTCAATTGCATCATTGAAGAAGGAAGCTGAGCTTTCATTTATTGAGCTAAATAGGATGAGACATCTTAAGGAGGAAAAAGAAGCAGATGCTCGCCTCTTGCAGTCAGAGTTGGAAGATATCAGAGCTCAATACAGTGACTTGAAACGCACTCTTTCTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAGCAAGTTTTCCAGCTAAAGGGTGAACTAAAGAAGAAGGATGATACGTTAACCAGCATGGAGAAGAGGTTCAAGGATAGTAACGGACGCACACAACATACTATCGGAACTAAAACCAGTCCAAAGAACCAAAAAACTGCTTCAATTCCTCAGAATTTAAAAGAAATGGCAAGTCTGAGGGAGAAAATAAAAAGGCTTGAGGGCTTAGTACAGTCAAAAGAAACTGCCTTGGAAACTTCAACTACTTCATTTTTGGAGAAGGAAAAGGAACTCCAGACCAAAGTTGTGGAGCTGGAGAACAAAGTGGAGGAATTCAATCAGAGTATTGCTTTGCAGAAGGTTCAAGATAGAAGCATTACTATTTCTAATGAGATATCTGGAGACGTAAGAAGTACAGTTGAGCATCTCAATGATGCTGCATGTGCGTGTGAAGAAAGCAGTGCTGAATTGTTATCCAAGAGTAATATAAACTTGCCAGAGAAAGATGCAGGAACCTCCATGATCAATATTGCGGACAGCGATCTTAGTGACATATTAACTGAGTTTTCCAAATTGAAGGAGAGAAACAGATCAATGGAAAGTGAACTTAAGGAGATGCAAGAAAGATACTCAGAAATGAGCCTCAAATTTGCTGAGGTAGAAGGCGAAAGACAACAGCTTGTTATGACTGTAAGAAACCTCAAGACTACCCAGAAGGGTTAA	3255	0.4086	MFRSGRWRSERNRVKAVFKLHFHATQVLQYGMDALVLSIVPGDIGKPTTTLEKATVRGGKCRWENPVYETVKFIQEPKTGKISDKIYHFWLSMGLSKASSIGEVSINFADYVDATKPSSVSLPIRNSHCDAVLHVSIQRLQENSDQREEDEYEDAKLKSDDRNARNQLSNGDTDESIRSYSSEDVSSKAIINGTSSGSDITLSSSDDSSGLDTPREIGPRKMNIHSTTNQLVSVMRHASESQNLAVNASTSMHQISHRDWSAGSELGLSISDSTNDSSNALSKERSQEASPLEIERLKAELDALARQVDVSDLELQTLRKQIVKESKRGQELTKEVIILKEEKEALRIECDNLRSFHKRMDEAKVRNRSRMEGGDLRAFVEEIRQELDYEKDLNANLRLQLKKMQESNAELVLAVQDLEEMLEQKNKDICNHSNKYEQGKNSPDNDEEQKALDELVKEHNDAKETTHLLEKKIIDLYSEIETYRRDKDELEMQMEQLALDYEILKQENHSIAHKLEQSQLQEQLKMHCECSYPPAAMNDIENHIENLENQLKEQSEEFSNSLATIKELETHIRRLEEELEKQAQGFEADIEAVTRDKVEQEQRAIQAEEALRKTRLKNANTAERLQEEFRRLSMQMTSTFDENEKAAMRALTEASELRVQKSLLEEKLHKVKEELHSTKADSEVKLNELSNQIDTMTVQIEQMLLEIEDKSKQLENQKQHGEQVSRDFSEEIGMLKAENEKLKVEISSLCEEVEGKENFRTDLELMKKSIEESETLLQKGTVERNELVSSIASLKKEAELSFIELNRMRHLKEEKEADARLLQSELEDIRAQYSDLKRTLSEDEAEKEKLRKQVFQLKGELKKKDDTLTSMEKRFKDSNGRTQHTIGTKTSPKNQKTASIPQNLKEMASLREKIKRLEGLVQSKETALETSTTSFLEKEKELQTKVVELENKVEEFNQSIALQKVQDRSITISNEISGDVRSTVEHLNDAACACEESSAELLSKSNINLPEKDAGTSMINIADSDLSDILTEFSKLKERNRSMESELKEMQERYSEMSLKFAEVEGERQQLVMTVRNLKTTQKG*	1085

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g02178	1084	Coils	Coil	537	617	-	-
	Rops1g02178	1084	Coils	Coil	380	428	-	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	140	224	-	-
	Rops1g02178	1084	PANTHER	MYOSIN HEAVY CHAIN-RELATED PROTEIN	1	1083	-	-
	Rops1g02178	1084	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	12	145	IPR019448	-
	Rops1g02178	1084	Coils	Coil	805	867	-	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	271	286	-	-
	Rops1g02178	1084	Coils	Coil	907	927	-	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	271	291	-	-
	Rops1g02178	1084	ProSiteProfiles	C2 NT-type domain profile.	6	141	IPR019448	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	141	168	-	-
	Rops1g02178	1084	Coils	Coil	939	966	-	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	881	898	-	-
	Rops1g02178	1084	Coils	Coil	445	507	-	-
	Rops1g02178	1084	Coils	Coil	1026	1067	-	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	876	898	-	-
	Rops1g02178	1084	Coils	Coil	294	349	-	-
	Rops1g02178	1084	Coils	Coil	654	752	-	-
	Rops1g02178	1084	MobiDBLite	consensus disorder prediction	169	211	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g02178	Rops-Chr1	43332284	43337664	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g02178	-		-	gmx:100792602	1527.69

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops1g02178	1	43332284	43337664	Rops2g00580	2	8377004	8382568	PCT