Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02143 ATGATGAAAGGTTCGAAGCGTTTCGCTGTGTCCGAACCCAACCAGGTCGATACCAACGAAACGGTGTTCCGGAACAAAAGAATAATGGAAGGATCACTCTTTGATGTCCATAGGGCAGAACCATCCCAACAACCAACAGTTGCAACACCACCACTGGATATGAAACGGGCAGAGTCGTCACAGCAGCATGTGAGAGCTTTAAATACCCAATTTGCAAGCTGGGTCCAAGCACAACTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGGGATTACTTAGATCACGCTTCAAGTATTATGCAAAAATTTAGTGATGTCGTCAGCTGGCTCAAAGCAAATGCCACCAAGGCAGAAAATTTGTCTCCTGTTGCTGGTGCTTCTTTTGCTGGGAAAAAATTCTTGCCTGAAGTAACAATGACAACGACAACAACAACCAAGCCTGAAGTAACAACGACAACCAAGCCCGAAGTGACAAACAAAGAAAATAAAGCTCCTGTTAGTACTCCTACAAATTTTGCTAGTTCTTGGAGCCCTGGAATATTTTCAAACAGTCAGAACCATTTTGCATTTGGAAATCAAAGTTCAGCTCCTTCTAACCAAGATGCTTCAGATGATGTAGATGGTGAAAATGACTTGGAGCAGCCTAGCAGCCCATCAGTGAAGAAGTCAGAAGAGAAAGGTGTGGTAGTTGTGCATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCGGCAGACAAGGATGTATGGAAAGATAAAGGAATGGGCCAGCTGTCTATTAAATGCAAAGAGGGTGTGAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTGGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACAAATCTACAAAAGAACTCTCTTGTTGCAATATTCCATACTTCGGGTAATGCTGATGGAAGTGGTGGAGATAATGATAGTGTTGTTGCACGTACATTTTTAATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACTATTCAGGAATATGCTCCAGTATCTTGA 1074 0.4227 MMKGSKRFAVSEPNQVDTNETVFRNKRIMEGSLFDVHRAEPSQQPTVATPPLDMKRAESSQQHVRALNTQFASWVQAQLKNHPDELWEDGVRDYLDHASSIMQKFSDVVSWLKANATKAENLSPVAGASFAGKKFLPEVTMTTTTTTKPEVTTTTKPEVTNKENKAPVSTPTNFASSWSPGIFSNSQNHFAFGNQSSAPSNQDASDDVDGENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPADKDVWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSLVAIFHTSGNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02143 357 SUPERFAMILY PH domain-like 224 354 - -
Rops1g02143 357 SMART ranbd_3 214 353 IPR000156 GO:0046907
Rops1g02143 357 PANTHER RAN BINDING PROTEIN 18 354 IPR045255 -
Rops1g02143 357 MobiDBLite consensus disorder prediction 189 227 - -
Rops1g02143 357 FunFam AT4g11790/T5C23_220 113 356 - -
Rops1g02143 357 MobiDBLite consensus disorder prediction 143 172 - -
Rops1g02143 357 ProSiteProfiles Ran binding domain type 1 profile. 224 352 IPR000156 GO:0046907
Rops1g02143 357 Gene3D - 123 356 IPR011993 -
Rops1g02143 357 CDD RanBD_NUP50 226 354 - -
Rops1g02143 357 MobiDBLite consensus disorder prediction 189 205 - -
Rops1g02143 357 Pfam RanBP1 domain 222 352 IPR000156 GO:0046907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02143 K14295 - gmx:100816975 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02143 1 42740994 42746644 Rops1g02143 1 42740994 42746644 ECH