Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02135 ATGGCGTCTTCACCTACACCCAGGGATGAGGTTGAGTCTCAAGATCAGCATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGAACAAGAACAACTTCCAATAGTGAAAGACAAAGAGTGCATCCACAAAACCAAAACGATTCAGTTTCTTGGACGCACCACTCCCATCATCCTTCAAAACGACAATGGCCCCTGCCCTCTCCTCGCTATCTGTAACGTTCTTCTGCTAAGAAACAACTTAAATCTGAGTCCAGATATTGCTGAAGTCTCACAGGAGAAATTGCTTTCATTGGTTGCTGACCGATTGATTGATTCAAATAGTAATGTGAATAACAAAGATGTAGCCTATGTTAACAATCAACAACAGAACATTGCCGATGCAATTGATTTGCTCCCTAGGCTTGCTACTGGAATTGATGTAAATATAAAGTTTAGGAGAGTAGATGATTTTGAATTCACTCGAGAGTGTGCCATATTTGATCTGCTGGACATCCCTCTGTACCATGGCTGGATAGTTGATCCTCAGGATTATGATACTGCAAATGCAATTGGATCAAAGTCTTATAATGCCCTTATGGGAGAGCTTGTTTCTCTTGAAACACGAAACATTGAAATCCAACCTAAAGTTAATCGGGAAGAAGATCCTGTTGATTTTCAGGCTGCAACAACTGCTGCGCTTGGAGTTCCTTCTCCTAGTCTTTCAAAAACCAGGTCCTTTGATGATTCTCCACATTCTATTTCTGATCTTGTTCCAAGAAAAGGTGATCTTGAAGAAGAGGCAGAGTTTTTGAGAGTCTTGAAGCTGTCTGAGGCTGATTCTAAAGCTTCAGTAAGTGATCCTGTTGTAGGTCATGTTAATGGTAATGAAGGAGCAATTTCTGTTGGTATGGACAAAAAAATGTGTAACAAACAGGTTATACCTGTGGATTCTGGCAATAAATTAGGAAAGAGCACCAGTGCTGAAAACAATGACTTTCATGAGCCAGAACCTTCCATTTCTAATGATTGCACTGCTTCTGGCAAAGACAGTAATGAACATGCATCTTCTTCATCTACACTGGGGGAAGCAGCTAGTTCATCCTTAAAGACTGATGCCACAAGTGGCTTTCATCAATCAGCTGATATGGGACCTGAAAGTTCAATTGGATGGTGTGACGTGGTTAAGAAGAATAACCTTGATGCATTGGTTCAGAATGAGAGTGCAACCATCCTTTCTCCTGAAAAATACTCTGCCCCTTTGTTTGAGAGTGGTGCAGATGTCACCGGAGGGGGTGGAGAAGTTCACAATCAATCCTCTCTTACAGCTATAGGTCATGAAGTTGCAGATGAATCTCGAGGACTTGATGCATCAGGTTTATCATGCTTATCCACAAGCCATACAAATTCAGATTCATCTACTGTCAGATTTTGTCAAACTGATGCTTCTGGAGCATTGCCTTCAAATGTTGATGGGAGTGAGCCCATATATGAAGGAGAGGAATGTGTATTGGATACAAGAACTGGAAATTTTGAGGATCGTGAACCTGTTTATGAAGGTGAGGTGGTGCTTGCTGAACAGGCTGGCAAAAGCACCTTAGCAGCCCCCGATCAAAGAGCTAAGGATGAAATTACTCCAGAACAAGGGGAATTGATCAAGAGCTTCCTGAGGAATAACGCCAGCCAGTTGACATTTTATGGTCTTTTCTGTTTACAAGATGGTCTTAAAGAACGTGAGCTATGTGTTTTTTTCCGAAACAATCATTTCAGCACCATGTTTAAGTTTGAGGGTGAGCTCTATCTTCTAGCTACTGACCAAGGTTACATAAATCAGCCTGATCTGGTGTGGGAAAAACTGAATGAGGTCAATGGTGATACATTGTTTATGACCAGTAGTTTCAAGGAATTCAAGGCAGAAAGTCATGAAAATAACACTTGGGATGAGAACAATGTTATGAGCAGCACTGCCGACTATCTTGCCAGCATAGATAGTGCAGCGCAGGCAGGCTTAGATATCAATTCCGATCTGCAATTAGCAATAGCCTTGCAACAACAGGAGTTTGAGCAGCAGCAGCCACGTCATAATTCACTGCAGTCATCCATTAGTGGTAGTGGCTCCAGACTGGTCACAGGTCCCCAGGTGGCAAGAAACACCGGAAGGAATTCATCTTCATCTTCATCTTCATCTTCATCTTCCAAGCCTGATGGAAAATCCAAAGAAAAATGTATAGTGATGTGA 2217 0.4181 MASSPTPRDEVESQDQHQDQDQDQDQDQEQEQLPIVKDKECIHKTKTIQFLGRTTPIILQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVADRLIDSNSNVNNKDVAYVNNQQQNIADAIDLLPRLATGIDVNIKFRRVDDFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALMGELVSLETRNIEIQPKVNREEDPVDFQAATTAALGVPSPSLSKTRSFDDSPHSISDLVPRKGDLEEEAEFLRVLKLSEADSKASVSDPVVGHVNGNEGAISVGMDKKMCNKQVIPVDSGNKLGKSTSAENNDFHEPEPSISNDCTASGKDSNEHASSSSTLGEAASSSLKTDATSGFHQSADMGPESSIGWCDVVKKNNLDALVQNESATILSPEKYSAPLFESGADVTGGGGEVHNQSSLTAIGHEVADESRGLDASGLSCLSTSHTNSDSSTVRFCQTDASGALPSNVDGSEPIYEGEECVLDTRTGNFEDREPVYEGEVVLAEQAGKSTLAAPDQRAKDEITPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTSSFKEFKAESHENNTWDENNVMSSTADYLASIDSAAQAGLDINSDLQLAIALQQQEFEQQQPRHNSLQSSISGSGSRLVTGPQVARNTGRNSSSSSSSSSSSKPDGKSKEKCIVM* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02135 738 MobiDBLite consensus disorder prediction 1 36 - -
Rops1g02135 738 Pfam MINDY deubiquitinase 72 196 IPR033979 GO:0004843|GO:1990380
Rops1g02135 738 MobiDBLite consensus disorder prediction 312 374 - -
Rops1g02135 738 MobiDBLite consensus disorder prediction 680 726 - -
Rops1g02135 738 MobiDBLite consensus disorder prediction 230 253 - -
Rops1g02135 738 MobiDBLite consensus disorder prediction 309 374 - -
Rops1g02135 738 PANTHER NF-E2 INDUCIBLE PROTEIN 21 721 IPR007518 GO:0004843|GO:1990380
Rops1g02135 738 MobiDBLite consensus disorder prediction 680 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02135 Rops-Chr1 42602962 42608991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02135 K01309 - gmx:100808340 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02135 1 42602962 42608991 Rops1g02135 1 42602962 42608991 ECH