Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02125 ATGGCAAAAGAGAAAAAAGAGTTGGGAACTCAGTGCTCACCTAGTTACACTGTCAAACAGGATATGTCTTCTGATAATGCGAAGGAAAATGCATCAGTAGTTGATTCATCAGTGACTGAATGGAAACATGACACTGGAAATTCAGATGACCCAGAAAGCTCAAGTTACAAGTTTAACGAAGACATTAGTCCAACTAGGGCCGATAAAGTGGGACATTCTCATTATCAGATAGGGCATCCAACTGGAACTGGAGTGGAAAAATTGTATAGTAATAAATATTTTGTCATTAAGAGTTTGAACCATCAAAATATCCGTTTGTCGATTGAGAAAGGAATTTGGGCTACTCAACTCATGAATGAACCAATTTTGGAAGAAGCTTTTCATAATTCAGGCAGCATAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGATGTCCTCCATTGGGTGGAGGAGAGACAATGTTTGGAGTGAGGGACATGGTAAAAGTAATCCTTGGGGTCGCAGTTTTAAGGTCAAATGGCTGTGTTTAAATGACTTGCCTTTCCATAAGACTCTTCATCTCAAGAATCCATTGAATGACTATAAACCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGATATTGGTCTAGCCCTTTGTGAACTCCTTGATGGTAAAAATGATGTGGATGGCCTGCTGACCAGTTCATCAAGGGACCATTTTTCTTTGAAGGGGCATTCTGTGAATGCTCCAAGTTCAATGAGAGATGAAGACTGTAACTTACCCTCACTGCCTTTGTCATGGTCAATGCACTTGCCTTATTCTTCCATGTTTTATCACAACATAGCTGAAGCAAATAAATTTCATTCAAGAAACCAGAGATTCAGTGGGAAAATGTTAACTGAAAAATTGCCTCTCACTTCTGAGTCATCTAAAGTGGCAGGGATTAAACGTTCGCATTTTAGTGGGCATATTCTGAAGCTACAAGTGGATAAGGATGTGGCTTCTCAATTTGATGTTTGGGGTCTATCTTCAGAAAGCCCTTTATCTAGTACCCTAACCGAGGATGATTTTCTTGACATGTCCTATGAAGACTACCTGGAGGTCCATAGCAGATGCAGGAAACAGTTACGCATCAGTGAAACTAAACCATCCCAGAAACAGCCGGAATCGTTAAGAAGTAATTCACATGATGATAATAGGAATTCAGATGATATTGAAAAAGACAGGAGCAACTCTCAGAGGAGGATGCATCAATCATCTTGGCCTTGGATCTAA 1287 0.3986 MAKEKKELGTQCSPSYTVKQDMSSDNAKENASVVDSSVTEWKHDTGNSDDPESSSYKFNEDISPTRADKVGHSHYQIGHPTGTGVEKLYSNKYFVIKSLNHQNIRLSIEKGIWATQLMNEPILEEAFHNSGSIILIFSVNMSGSFQGYAQMMSSIGWRRDNVWSEGHGKSNPWGRSFKVKWLCLNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNDVDGLLTSSSRDHFSLKGHSVNAPSSMRDEDCNLPSLPLSWSMHLPYSSMFYHNIAEANKFHSRNQRFSGKMLTEKLPLTSESSKVAGIKRSHFSGHILKLQVDKDVASQFDVWGLSSESPLSSTLTEDDFLDMSYEDYLEVHSRCRKQLRISETKPSQKQPESLRSNSHDDNRNSDDIEKDRSNSQRRMHQSSWPWI* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02125 428 MobiDBLite consensus disorder prediction 42 60 - -
Rops1g02125 428 Pfam YT521-B-like domain 91 226 IPR007275 GO:0003723
Rops1g02125 428 Gene3D ph1033 like domains 78 237 - -
Rops1g02125 428 CDD YTH 92 226 IPR007275 GO:0003723
Rops1g02125 428 MobiDBLite consensus disorder prediction 381 428 - -
Rops1g02125 428 MobiDBLite consensus disorder prediction 395 418 - -
Rops1g02125 428 MobiDBLite consensus disorder prediction 1 60 - -
Rops1g02125 428 ProSiteProfiles YTH domain profile. 91 226 IPR007275 GO:0003723
Rops1g02125 428 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 70 408 IPR045168 -
Rops1g02125 428 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02125 Rops-Chr1 42500182 42504245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02125 K20100 - gmx:100784130 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02125 1 42500182 42504245 Rops1g02125 1 42500182 42504245 ECH