Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02111 ATGTCAGAAACATCTAAATTAGGAGAGAACCTAAGCTTAAACCATCAAACTAACCAACCACCTTCATCTTCTCCACCATCACAAACTCAAAAATGCCCTGCCAACCTGGTGAAGATGCTGCTATCAGAGCTAAAGGTTCAAAGAGGAATAGCCCTTCCAATGGTGGCCATGAACTTGGTTTGGTTTGCAAAGACAGCCATCACAACAGCATTTTTGGGCCGCTTGGGGGAGCTCAACTTAGCTGGTGGTGCGCTTGGATTCACTTTTGCTAATGTCACTGGCTTCTCTGTCTTGAATGGTCTGTGTGGTGCCATGGAACCCATCTGTGGACAGGCTCATGGGGCTAAAAACGCAAGGCTCCTTCACAAGACCCTTCTCATGACAATCTTATTGTTGCTATTGGTAACACTTCCCATTACTTTCTTGTGGCTTAATGTTGACAAATTTTTTATTCTTTTTGGCCAACAAGAAGACATCTCGACTGTTGCCAGGAACTATATTTTCTATCTCATACCAGACTTGTTTGTCACCTCACTCTTCTGTCCCTTAAAAGCCTACTTGAGCTCTCAAAGCATAACTCTTCCTATCATGTTTAGTTCAGCTGTAGCACTAGCTTTCCACATACCCGTTAACATGATACTCTCAAAGACCATGGGTCTCGGAGGAGTTTCCATGGCAGTTTGGATAACTGATCTTATTGTTGTGGTTCTGCTGGCCGTTTATGTTATAATTCTAGAGAATAGAAAGGGAAGCATGTGGAAGGAAGGAGGATGGTGGGATCAGAGCATTGTAGATTGGATTAGGCTACTCAAGCTTTGTGGATCATGCTGCCTCAACACATGCCTAGAGTGGTGGTGCTATGAGATTCTAGTCTTGCTTACTGGCCACCTCACAAACGCTAAGCAAGCAGTGGGAGTTTTGGCAATTGTGCTAAACTTTGATTACTTACTTTTTTCAGTGATGCTATCACTAGCCACTTGTGTTTCCACCCGTGTCTCGAATGAGCTTGGTGCTAACCAAGCTGGCCATGCTTACAGATCAGCGTGTGTCTCTCTAACATTGGGCTTTATCTCAGGTTGCATGGGCAGCTTGGTAATGGTGGCTGCCAGGGGATTTTGGGGGCCCCTGTTTAGCCATGATAGGGGAATTATAAATGGAGTAAAGAAGACAATGTTGCTTATGGCTCTGGTGGAAGTGTTTAATTTTCCATTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCTCGACCTTGGTTGGGCATGTATGCTAATCTAGGTGGATTTTATTTCCTGGCCCTGCCCCTTGGTGTGGTTTTTGCCTTCAAGCTCCGTCTCGGGCTTGTTGGACTCTTTATTGGACTTGTTACTGGTATTGTTACCTGCTTGTCGATACTATTGGTATTTATTGCGAGGATAAACTGGGATGAAGAAGCTGCCAAGGCACAAAAACTAGCCAGCAGCGAGCAGGTTAAGGAAGTTCCCAAATATGACGTAGAAGAACGAATTGAGGCCTCTGAAAATGAAATATAA 1530 0.4464 MSETSKLGENLSLNHQTNQPPSSSPPSQTQKCPANLVKMLLSELKVQRGIALPMVAMNLVWFAKTAITTAFLGRLGELNLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNARLLHKTLLMTILLLLLVTLPITFLWLNVDKFFILFGQQEDISTVARNYIFYLIPDLFVTSLFCPLKAYLSSQSITLPIMFSSAVALAFHIPVNMILSKTMGLGGVSMAVWITDLIVVVLLAVYVIILENRKGSMWKEGGWWDQSIVDWIRLLKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGHAYRSACVSLTLGFISGCMGSLVMVAARGFWGPLFSHDRGIINGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFIGLVTGIVTCLSILLVFIARINWDEEAAKAQKLASSEQVKEVPKYDVEERIEASENEI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02111 509 MobiDBLite consensus disorder prediction 1 31 - -
Rops1g02111 509 Pfam MatE 276 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops1g02111 509 Pfam MatE 53 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops1g02111 509 PANTHER MULTIDRUG RESISTANCE PROTEIN 36 474 - -
Rops1g02111 509 NCBIfam MATE family efflux transporter 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops1g02111 509 CDD MATE_eukaryotic 43 480 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02111 Rops-Chr1 42330561 42332456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02111 K03327 - gmx:100804083 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02111 1 42330561 42332456 Rops1g02111 1 42330561 42332456 ECH