Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02109 ATGGAGTGGCCTGCTAGCACGGATGAATACGAAAAGCTTTTAATTCGAATGAGCACCCCCAGGGTTGTCATTGACAATACCGTGTGCTCTGCAGCGACTCTGGTCAAGGTTGATAGTGCCAGAAGGCATGGTAGCCTATTGGAAGCCATACAAGTACTCACTGATCTTGACCTTTCAATTAAGAAGGCCTATATTTCCTCTGATGGCAAGTGGTTCATGGATGTTTTCCATGTCACTGATCAAAACGGAAACAAATTAACAGACGAGAGCGTTTTAAAGTACATTGAACAGTCACTTGGTACAATTCACTATGGGAGAACCAATTGCTCAAACGGTCTCACTGTGCTGGAATTAACTGGAACTGACCGTGTCGGTCTTCTATCAGAGGTGTTTGCTGTACTGGCTGATCTTCAATGTGATGTGGTTGAGGCTAAGGTTTGGACTCACAATGGCCGCATTGCCTCCTTAATCTATGTAAAGGACTGCAATTCTGGATCCACTATTGAGGACTCTCAGAAAATTAATAAGATTGAAGTGCGTTTAAGAAATGTTTTGAAGGGAGACAATGACATTAGAAGTGCAAAAACTTCTGTCTCTATGGCTGTCATGCACACTGAAAGAAGGCTGCATCAAATAATGTTTGCTGACCGTGATTACGATAGGACTCCCATTCTCAAGTTTACTTCTGATAATGCAGTAGTAACCGTCCAGAATTGGGCAGAAAGGGGTTATTCAGTTGTGAATGTTCAAAGCAAGGATCGAATCAAGCTATTATACGATGTTGTGTGCAATTTGACAGACATGGAATATGTTGTATTTCATGCAACTATTAACACTAATTGTGACCGAGCATACTTGGAGTTTTATATAAGACACAAAGATGGCACCCCAATTAGTTCAGAACCAGAGCGTCAACGTGTAGTTCAATGCTTAAAAGCTTCTGTGGAGAGACGGGCATCTGAGGGTGTTCGACTTGAGTTATGCACGGAAGACAGGCAGGGGCTTCTAGCAGAAGTGATGAGAACTTTCCGAGAGAATGGTCTGAATGTGACAAGGGCTGAAATATCCACCATAGGGAACATGGCTACAAATGTGTTCTATGTAACGGATGTGATTGGAAACCCAGCTGATCCAAAAATTATCGAATCTGTTAGGCTGAAAATTGGGTCAAACAATTTAGAAGTGAAGGAGTTACCATTGCCATATGATCAAAAGGCAGAGAAAGATGATGAAACAGTTGGAATTGGCGGGGCAGTGTTGTGGTCTATTGGGAGCCTTGTGAGAAGGAATCTGTACAATTTGGGACTAATCAAATCCTGTTCTTAA 1326 0.4223 MEWPASTDEYEKLLIRMSTPRVVIDNTVCSAATLVKVDSARRHGSLLEAIQVLTDLDLSIKKAYISSDGKWFMDVFHVTDQNGNKLTDESVLKYIEQSLGTIHYGRTNCSNGLTVLELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSTIEDSQKINKIEVRLRNVLKGDNDIRSAKTSVSMAVMHTERRLHQIMFADRDYDRTPILKFTSDNAVVTVQNWAERGYSVVNVQSKDRIKLLYDVVCNLTDMEYVVFHATINTNCDRAYLEFYIRHKDGTPISSEPERQRVVQCLKASVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGNMATNVFYVTDVIGNPADPKIIESVRLKIGSNNLEVKELPLPYDQKAEKDDETVGIGGAVLWSIGSLVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02109 441 SUPERFAMILY ACT-like 30 98 IPR045865 -
Rops1g02109 441 CDD ACT_ACR_3 244 318 - -
Rops1g02109 441 CDD ACT_ACR_2 114 187 - -
Rops1g02109 441 Pfam ACT domain 114 169 IPR002912 -
Rops1g02109 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Rops1g02109 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Rops1g02109 441 Gene3D - 322 386 - -
Rops1g02109 441 Gene3D - 113 188 - -
Rops1g02109 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Rops1g02109 441 CDD ACT_ACR_4 322 393 - -
Rops1g02109 441 CDD ACT_ACR_1 32 103 - -
Rops1g02109 441 SUPERFAMILY ACT-like 320 387 IPR045865 -
Rops1g02109 441 SUPERFAMILY ACT-like 111 172 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02109 Rops-Chr1 42306400 42309622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02109 - - lja:Lj2g3v2002690.1 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02109 1 42306400 42309622 Rops1g02109 1 42306400 42309622 ECH