Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02106 ATGGCTGATCTATTAGCGTGGCTCATCTCCTTCCTCCTCCTCATTGCCTTACTCGTTCTCGTCACTTACCAGCTAATGTGCCTTGCAGACCTGGAATTTGATTATATAAATCCTTATGATTTCTCATCTAGAATAAATGCGGTGGTATTGCCTGAATTTATTGTACAAGGTGTCCTATGCTGCTTCTACCTTGTCACAGGGCATTGGTTTATGTCATTGTTCTGTGCTCCTTATCTATACTACGATATCCGAGTGTATAGACAAAGAAAGCATTTAGTTGATGTTACTGAGATATTCAACCAGCTCTCTTGGGAAAAGAAGCTACGACTTGTCAAACTCTTCTATCTTGTTTTTACCCTTTTCCTCTCTGTATTTTGGATGATCTATACATCACTGGATGACCATGATGGATAA 414 0.3961 MADLLAWLISFLLLIALLVLVTYQLMCLADLEFDYINPYDFSSRINAVVLPEFIVQGVLCCFYLVTGHWFMSLFCAPYLYYDIRVYRQRKHLVDVTEIFNQLSWEKKLRLVKLFYLVFTLFLSVFWMIYTSLDDHDG* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02106 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Rops1g02106 137 PANTHER CORNICHON-RELATED 6 128 - -
Rops1g02106 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02106 Rops-Chr1 42212945 42215278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02106 K20368 - gmx:100780362 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02106 1 42212945 42215278 Rops1g02106 1 42212945 42215278 ECH
Rops2g04217 2 76623698 76626952 Rops1g02106 1 42212945 42215278 PCT