Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02081 ATGAACTCAGACAGAGATCATCCTCAAGAGTCCAAGAAATGGGGAAAACTGGTTTCGGCCACGTTGACAGCGGCGGTTATTGCCTTCAGTTCTGACATGTCTGCCCTTGCTGATCTTAACAAATATGAGGCTGAAATAAGGGGTGAATTTGGGATTGGATCGGCTGCACAATATGGCTCTGCAGACCTCAGGAAAGCGGTGCATGTGAATGAAAATTTCAGAAGAGCCAATTTCACAGCTGCTGATATGAGAGAATCTGATTTTAGCGGTTCAACTTTCAATGGTGCATACCTTGAGAAAGCTGTAGCATACAAGGCAAATTTTACAGGTGCCGATTTTAGTGATACATTGATGGATCGCATGGTTCTTAATGAAGCTAATCTCACAAATGCCATTCTCGCTAGAACAGTACTCACACGGAGTGACCTTGGAGGTGCTGTCATTGAAGGTGCTGACTTTAGTGATGCTGTGTTGGACCTTCCCCAAAAGCAGGCTTTATGCAAGTATGCTAGTGGGACAAATCCTGTAACAGGAGTAAGCACAAGAGTGAGCTTAGGTTGCGGGAACAAACGACGAAATGCTTATGGCTCCCCATCATCTCCCCTTATAAGTGCTCCACCACAGAAACTGCTTGACCGAGATGGTTTCTGTGATGAAGCAACAGGCCTTTGCGATGCAAAGTAG 684 0.4547 MNSDRDHPQESKKWGKLVSATLTAAVIAFSSDMSALADLNKYEAEIRGEFGIGSAAQYGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADFSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLISAPPQKLLDRDGFCDEATGLCDAK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02081 227 Gene3D - 55 188 - -
Rops1g02081 227 SUPERFAMILY Pentapeptide repeat-like 60 158 - -
Rops1g02081 227 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 17 226 - -
Rops1g02081 227 Pfam Pentapeptide repeats (8 copies) 123 158 IPR001646 -
Rops1g02081 227 Pfam Pentapeptide repeats (8 copies) 81 117 IPR001646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02081 Rops-Chr1 41833354 41836960 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02081 - - gmx:100805220 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02081 1 41833354 41836960 Rops1g02081 1 41833354 41836960 ECH