Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02074 ATGCCAATGAGATTAATTATGTCCACCGCAACTCCACTACTCACGCCACGCCACGTAGCAGTGATCGGTGCTGGCGCCGCCGGTATGGTGGCGGCACGCGAGCTCCGACGAGAAGGGCATAAGGTGGTGGTTTTCGAGCGAGGGGACCAAGTGGGTGGGTCGTGGGTGTACAGTTCAGAGGTGGAATCAGACCAGCTTGGTTTGGACCCGAAGCGGAGCGTGGTCCACTCGAGCCTGTACGAGTCGCTCCGAACCAACCTGCCTCGGGAAACCATGGGGTTCCTAGATTACCCTTTTAGGAGGAGAGAGGGTAAGGGGAGAGACCCGAGAAGGTTCCCAGGTCACAGAGAAGTGTTGATGTATTTGCAAGATTTCGCTTCTCATTTTGAGATCTATGAACTTGTGAGGCTTCAAACGGATGTGGTTTTTGCTGGTTTGGGTGAGGATGGGAAATGGAGGGTCAGATCAAGACCACCCAATAATAGTGAATGTGTGGATGAGATTTACGACGCCGTTGTCGTTTGCAACGGACATTACGTTCAGCCTCGACTCCCTCTTATACCCGGCATTAGTGCATGGCCAGGGAAGCAGATGCATAGCCATAATTATAGGACACCTGAGCCCTTTCAAGATCAAGTAGTAGTTCTAATAGGTAACGCTGCTAGTGCGGTTGATATCACTCGAGACATTGCAACAGGTGCTAAAGAAGTCCACATTGCAGCTAGGTCGGTTGAAGAAGATAAGCTTGGGAAGTTGCGTGGCCATGATAACGTGTGGCTTCATTCTATGATTGATAGCGTTCATGAAGATGGTACAGTGGTTTTCAAAGATGGAAATGCAGTTGCTGCTGATTTCATTATACACTGCACAGGGTACAAGTATGATTTTCCTTTCCTTGAAACCAACGGCATGGTGACTGTAGATGACAATCGTGTAGGACCACTCTACAAGCATCTTTTTCCACCAGCTTTAGCTCCATGGCTTTCTTTTGTTGGGTTGCCTTGGAAGGTTTTGCCCTTCCCCATGTTCGAACTGCAGAGCAAGTGGATAGCTAGAATATTGTCTAATCGCATTGCACTTCCTTCAGAAAAGGAGATGGCTGAAGATATTGAAGCTTTTTACTTATCACTTGCAGCGTTTGGCACTCCTAAGAGTTACACTCATAGGATGGACCTTGATCAGTGGGACTACGATAACTGGATTGCGGATAAGTGTGGGGTCCCTGGTATTGAAGAATGGAGAAAGCAAATGTATATGGCCACATCTAAGAACAGGCTCCTGCGACCAGAGTCTTACCGTGACGAGTGGGACGATGATGAATTTGTTCTAATAGCTGAACAGGATTTTGCTAATTATCCGAACTGA 1365 0.4799 MPMRLIMSTATPLLTPRHVAVIGAGAAGMVAARELRREGHKVVVFERGDQVGGSWVYSSEVESDQLGLDPKRSVVHSSLYESLRTNLPRETMGFLDYPFRRREGKGRDPRRFPGHREVLMYLQDFASHFEIYELVRLQTDVVFAGLGEDGKWRVRSRPPNNSECVDEIYDAVVVCNGHYVQPRLPLIPGISAWPGKQMHSHNYRTPEPFQDQVVVLIGNAASAVDITRDIATGAKEVHIAARSVEEDKLGKLRGHDNVWLHSMIDSVHEDGTVVFKDGNAVAADFIIHCTGYKYDFPFLETNGMVTVDDNRVGPLYKHLFPPALAPWLSFVGLPWKVLPFPMFELQSKWIARILSNRIALPSEKEMAEDIEAFYLSLAAFGTPKSYTHRMDLDQWDYDNWIADKCGVPGIEEWRKQMYMATSKNRLLRPESYRDEWDDDEFVLIAEQDFANYPN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02074 454 PANTHER DIMETHYLANILINE MONOOXYGENASE 17 437 - -
Rops1g02074 454 Pfam Flavin-binding monooxygenase-like 258 374 IPR020946 GO:0004499|GO:0050660|GO:0050661
Rops1g02074 454 Pfam Flavin-binding monooxygenase-like 17 243 IPR020946 GO:0004499|GO:0050660|GO:0050661
Rops1g02074 454 SUPERFAMILY FAD/NAD(P)-binding domain 257 441 IPR036188 -
Rops1g02074 454 FunFam Flavin-containing monooxygenase 186 289 - -
Rops1g02074 454 Gene3D - 19 434 IPR036188 -
Rops1g02074 454 Gene3D - 186 289 IPR036188 -
Rops1g02074 454 PRINTS Flavin-containing monooxygenase (FMO) signature 225 240 IPR000960 GO:0050660|GO:0050661
Rops1g02074 454 PRINTS Flavin-containing monooxygenase (FMO) signature 341 354 IPR000960 GO:0050660|GO:0050661
Rops1g02074 454 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Rops1g02074 454 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Rops1g02074 454 PRINTS Flavin-containing monooxygenase (FMO) signature 198 212 IPR000960 GO:0050660|GO:0050661
Rops1g02074 454 PRINTS Flavin-containing monooxygenase (FMO) signature 276 303 IPR000960 GO:0050660|GO:0050661
Rops1g02074 454 SUPERFAMILY FAD/NAD(P)-binding domain 15 242 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02074 Rops-Chr1 41702168 41705656 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02074 - - gmx:100793203 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02074 1 41702168 41705656 Rops1g02074 1 41702168 41705656 ECH