Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01984 ATGGATTTCTCTGAGAAAGACCTATTCGGTGAAGATTCCGACAACGAAAAAGAACAAGATGGAAGCCATTCTTCCTCCCCTTCTTCCTCATCTTCCGGTTCCTCTTCTGCATCCTCATCATCTTCCGCTTCTTCATCTAACGCCAGTGATGGTGGCGCTGACTCCAGCTCCGCCAGCGGAAGCGCCAGCAGTGGCGGTGACGATGATGCGGAGAATGGAGATGTTGTAGATAGTAGCAATCCCCATGCCCATCACCATGAAGACAAAGATCTATTTGGCTCAGATGATGAGAATTTTTCCAAAACCCTCCCTAAAAGCTCTTTCTCTATTCCTGCATTGCCCGCCACCCGCAATGCGAATAATCAGGGTAGAGGGGGGTTTGGCCGTGGCCGTTGGCAGCCTGGCCATCACAATGATAGAGGAGCTGGCATCCTTCCGCGTCCTGGACCTTATCCTCAGAGGCAGAATTTTGGGTATGGAAATAGGTTTTCAAATGGTCGTCATGATGAACGATTTGTCTCTGATATGAAGCTTTCAAAGAGTGAAGAAACTCTGTCAAGAAAGTGCATTGCGTTTCAGGAGCCTTGTGAAATTGCCAGCTATAGTCGTGTAGAAGGTGGAGAAGTATATTTTGACGATCGTAGCTTGAGGCTCTTTAAGCGCCATATAACTGAAGATGTTGGAGCTGATTTGAATGAAGGTTATGATACATTCATTGCCAAAAAAGACCTAGGCTCGGAGGGCTTTGGCGATCTTCTTGCTTGCATTAGAGACAAAAGTATCCCACTTCAAAACATTCATTTTGTGACGTTCCGTAACAATCTAAACAAGATACTGGCTACAGCTTACATTCGTCATGAGCCTTGGGAAATGGGAGTGCACAAAAGGAATGGTGTTGTCTATCTCGATGTACATAAGCTACCAGAAAGACCACAAAGTGATTTAGAGCGCAGGAGATGTTATACAGGTTATTGTTTTGAGAGCCTTGCCACTGAAGATCCTAGAAGAGCAGATGGAGAGGGGATACATCATGTCGATGCCAATGTTGAATTCTGTTCTGTAATCAAAACAAAACTGGGGGCTCACCGTATCTTAATGGGTGCTGAGATGGATTGCTGTGATTCAACAAATGATGGAAAGAGATTTTATGTGGAGTTAAAGACAAGTTATGAGTTGAATTATCATAATGAGGAAAAATTTGAGAGAGAAAAACTGCTAAAGTTTTGGATTCAATCATTCCTGGCCGGTGTTCCATTTATTGTCATAGGATTTAGGGATGATGCAGGTCGTCTTGTTCGAACAGAAAGACTTAGAACCAAAGACATAACGCAGAGAGTAAAAATGAAGAACTACTGGCAGGGAGGAGTCTGCTTGGCATTTGCCGATGAGGTATTATGCTGGCTGTATGGAACAGTCAAAGAAAATGAAGATTACATATTGCAGTTTGCTCCACCTTTCAACCGTTTGGAGCTTCTGCAAGCCCAGTCTTGCCCAGATGTAATTACTCATCATCTGGAGCTGTTGTGA 1527 0.4407 MDFSEKDLFGEDSDNEKEQDGSHSSSPSSSSSGSSSASSSSSASSSNASDGGADSSSASGSASSGGDDDAENGDVVDSSNPHAHHHEDKDLFGSDDENFSKTLPKSSFSIPALPATRNANNQGRGGFGRGRWQPGHHNDRGAGILPRPGPYPQRQNFGYGNRFSNGRHDERFVSDMKLSKSEETLSRKCIAFQEPCEIASYSRVEGGEVYFDDRSLRLFKRHITEDVGADLNEGYDTFIAKKDLGSEGFGDLLACIRDKSIPLQNIHFVTFRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLERRRCYTGYCFESLATEDPRRADGEGIHHVDANVEFCSVIKTKLGAHRILMGAEMDCCDSTNDGKRFYVELKTSYELNYHNEEKFEREKLLKFWIQSFLAGVPFIVIGFRDDAGRLVRTERLRTKDITQRVKMKNYWQGGVCLAFADEVLCWLYGTVKENEDYILQFAPPFNRLELLQAQSCPDVITHHLELL* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01984 508 MobiDBLite consensus disorder prediction 1 21 - -
Rops1g01984 508 MobiDBLite consensus disorder prediction 1 165 - -
Rops1g01984 508 PANTHER DOM-3 RELATED 9 496 IPR039039 -
Rops1g01984 508 MobiDBLite consensus disorder prediction 78 96 - -
Rops1g01984 508 Pfam RAI1 like PD-(D/E)XK nuclease 370 432 IPR013961 -
Rops1g01984 508 MobiDBLite consensus disorder prediction 22 66 - -
Rops1g01984 508 MobiDBLite consensus disorder prediction 99 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01984 Rops-Chr1 40113650 40131080 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01984 K14845 - gmx:100798780 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01984 1 40113650 40131080 Rops1g01984 1 40113650 40131080 ECH