Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01966 ATGTCAGCGGCGCAGGTGGATCCGCATGATAAGATGAGGGCCAGGGACGTGAGCAAAGTGACACGGGGTGAGCAAGCTCCAAGGCCTGCTCATGAATACGGCACCGTTTCTCCACCCCCTCCTCCCTCTTCAACTGATACCAAGAAGACCAGGAAGGGGGAAGCTGAAAACGGTGCCGAATTGCCATCCACTGATTACCAAACACGACATTGTTATGTAAAATACGTGGAGTATCACAGATGCATTCAGCAGAAGGGCGAAAAGGCACCCGAAAGCCAAAAACTTGGCACGGATTTAAGGTCCTTATGTCCAACCGAATGGATTACAGAATGGGATAAAGAGAGAGAAGAGGGGAGGTTCCCTGGAGAAATATAG 375 0.504 MSAAQVDPHDKMRARDVSKVTRGEQAPRPAHEYGTVSPPPPPSSTDTKKTRKGEAENGAELPSTDYQTRHCYVKYVEYHRCIQQKGEKAPESQKLGTDLRSLCPTEWITEWDKEREEGRFPGEI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01966 124 SUPERFAMILY Cytochrome c oxidase subunit h 58 123 IPR036549 GO:0005739|GO:0045277
Rops1g01966 124 MobiDBLite consensus disorder prediction 8 26 - -
Rops1g01966 124 MobiDBLite consensus disorder prediction 1 64 - -
Rops1g01966 124 CDD Cyt_c_Oxidase_VIb 67 122 IPR003213 GO:0005739
Rops1g01966 124 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 68 111 - -
Rops1g01966 124 Gene3D Cytochrome c oxidase, subunit VIb 37 124 IPR036549 GO:0005739|GO:0045277
Rops1g01966 124 Pfam Cytochrome oxidase c subunit VIb 65 117 IPR003213 GO:0005739
Rops1g01966 124 PANTHER CYTOCHROME C OXIDASE SUBUNIT 6B 64 123 IPR003213 GO:0005739
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01966 Rops-Chr1 39742423 39748206 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01966 K02267 - gmx:102665439 195.667