Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01962 ATGACTGCTTCTTCAGAGAGTTGCGTCGAAAGCAAAAGTTCTCTCACCAGACTTGCTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACTCTTTGTGATTCTGATCCACTCCACTACTATGCTTTCCGTGAAATGCTCCAAGAGATTGGTTTTAATGGGGGGACTCCTATAACTGAGGAATTTTTCATTGAGATTGTTGCTGGCAAGCACAACGATGATATTGCCTTGTCTCTCTTTCCTGATGATCTGCAACGAGGTTTGAAGTTTGTAGATGATAAGGAAGTCATGTTCCGGAGATTGGCGGCTGAGCAACTGAAGCCTTTAAATGGCCTTGATAAAGTGAGGAAATGGGTTGAAAATCGTGGGCTGAAGCGAGCTGCAGTTACTAATGCTCCAAGAGCAAATGCAGAATTCATGATCTCAAAACTTGGTCTCTCAGATTTCTTTGATGCTCTTATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACTTGAAAGCTCTTGAGGTTCTGAAGGCATCAAAGGATCACACATTTGTATTCGAGGATTCTGTTTCAGGAATCAAAGCTGGAGTGGCAGCTGGGATGCCTGTTATAGGTTTAGCAACCCGAAATCCAGAGCATTTACTGATGGAAGCAAAGCCTGCCTTTTTGATCAAGGATTATGCCGATCCAAAATTATGGGCAGCTTTGGAAGACCTTGACAAGGCTAGTGCTCGTTAA 738 0.4363 MTASSESCVESKSSLTRLAPLEAVLFDIDGTLCDSDPLHYYAFREMLQEIGFNGGTPITEEFFIEIVAGKHNDDIALSLFPDDLQRGLKFVDDKEVMFRRLAAEQLKPLNGLDKVRKWVENRGLKRAAVTNAPRANAEFMISKLGLSDFFDALIIGGECEHAKPHPDPYLKALEVLKASKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPEHLLMEAKPAFLIKDYADPKLWAALEDLDKASAR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01962 245 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Rops1g01962 245 Gene3D - 22 229 IPR023214 -
Rops1g01962 245 SUPERFAMILY HAD-like 18 238 IPR036412 -
Rops1g01962 245 NCBIfam HAD-IA family hydrolase 97 205 IPR006439 -
Rops1g01962 245 CDD HAD_BPGM-like 23 208 - -
Rops1g01962 245 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 22 241 - -
Rops1g01962 245 Pfam Haloacid dehalogenase-like hydrolase 24 205 IPR041492 -
Rops1g01962 245 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
Rops1g01962 245 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 21 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01962 Rops-Chr1 39715926 39718952 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01962 - - gmx:100802762 433.721