Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01951 ATGGCAACCATTCATCTCTCTACCGCTACGCTTTCGTCTCTCTTCGACTCTGATTTCTCTTCTTCTTCTTCCACCAAATATCTTCTACCATTTCACTCTAAGCCCCCAAGGAAACGCATTCCACACCTTCAAATTACCTCCTCCAATGCCTCTCCCACTCTCGGCAATACAAACTCTTCGTTTGAGGTGCAGTTCAGTGATTATAGTGCGAACGTGGCAAATTCAGATGCGCGTACGAAAACTAAGATCGTATGCACGATAGGTCCATCTACCAGCTCACGTGACATGATATGGAAACTCGCTGAAACTGGAATGAACGTCGCACGTTTGAACATGTCGCATGGGGACCACTCCTCGCACCAGAAAACTATTGATTTTGTTAAGGAATACAATGCTCAATTCGAAGACAAGATTATAGCCATCATGCTTGACACTAAGGGTCCTGAAGTTAGAAGTGGGGATGTACCCCGGCCAATTTTACTTAAAGAGGGGCAAGAATTCAATTTCACCATTACGAGAGGGGTCAGTACTCAAGACACTGTAAGTGTCAATTATGATGATTTTGTCAACGATGTTGAGGTTGGAGACGTACTACTTGTTGATGGAGGAATGATGTCTCTTGCTGTTCAGTCAAAGACAAAAGACTTGGTTAAATGTGAAGTTATTGATGGTGGAGAACTGAAATCCAGGCGTCATTTAAATGTCCGCGGGAAAAGTGCAACACTTCCTTCCATAACTGAAAAGGACTGGGAAGATATTAAGTTTGGGGTTGACAATCAAGTAGACTTCTATGCTGTATCCTTTGTCAAGGATGCTAGAGTGGTTCATGAGTTAAAAGACTACCTCAGAAGTCGCAATGCTGATATACACGTGATTGTAAAAATTGAAAGTGCAGATTCCATATCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATTAGAAGATGCCACAGTATGCAAAAGCCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCATCCCACACCAACTAGGGCAGAAGTCTCAGACATTGCAATCGCAGTAAGACAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCACATGGAAAATTTCCATTGAAAGCTGTTAAAGTTATGCATGCTGTGGCTCTAAGGAATGAATCCAGGGTTCCAAGAAGTGATGCTTATCCAAATCAATTGAGTTCCCATAAAAGCCATATGGGAGAAATGTTTGCTTTCCATGCGACAATTATGTCTAACACTCTTAGTACTCCTATTATTGTTTTCACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCCTACTCAACAATCTTTGCATTCACAAATGAAGCAAGGATTAAGCAGAGGTTGGCACTTTATCATGGTGTTATGCCCATATACATGCAATTTTCAAACGATGCAGAAGAGACCTTCTCTAGAGCCCTCAAACTACTATTGAGTAAGGGTCATTTACATGAGGGACAGCATGTTACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACTCACCACATACAAGTCCGCAAGGTTCGTGGATAA 1653 0.4235 MATIHLSTATLSSLFDSDFSSSSSTKYLLPFHSKPPRKRIPHLQITSSNASPTLGNTNSSFEVQFSDYSANVANSDARTKTKIVCTIGPSTSSRDMIWKLAETGMNVARLNMSHGDHSSHQKTIDFVKEYNAQFEDKIIAIMLDTKGPEVRSGDVPRPILLKEGQEFNFTITRGVSTQDTVSVNYDDFVNDVEVGDVLLVDGGMMSLAVQSKTKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLRSRNADIHVIVKIESADSISNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVRQGADAIMLSGETAHGKFPLKAVKVMHAVALRNESRVPRSDAYPNQLSSHKSHMGEMFAFHATIMSNTLSTPIIVFTRTGSMAILLSHYRPYSTIFAFTNEARIKQRLALYHGVMPIYMQFSNDAEETFSRALKLLLSKGHLHEGQHVTLVQSGAQPIWREESTHHIQVRKVRG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01951 550 FunFam Pyruvate kinase 244 409 - -
Rops1g01951 550 Pfam Pyruvate kinase, barrel domain 80 416 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 Gene3D - 80 409 IPR040442 -
Rops1g01951 550 Pfam Pyruvate kinase, alpha/beta domain 448 528 IPR015795 -
Rops1g01951 550 PRINTS Pyruvate kinase family signature 387 403 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PRINTS Pyruvate kinase family signature 261 275 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PRINTS Pyruvate kinase family signature 343 367 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PRINTS Pyruvate kinase family signature 368 386 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PRINTS Pyruvate kinase family signature 137 153 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PRINTS Pyruvate kinase family signature 291 317 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PRINTS Pyruvate kinase family signature 318 342 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 Gene3D - 410 528 IPR036918 -
Rops1g01951 550 ProSitePatterns Pyruvate kinase active site signature. 289 301 IPR018209 GO:0004743|GO:0006096
Rops1g01951 550 FunFam Pyruvate kinase 410 529 - -
Rops1g01951 550 FunFam Pyruvate kinase 149 242 - -
Rops1g01951 550 Gene3D - 148 243 IPR015806 GO:0004743|GO:0006096
Rops1g01951 550 NCBIfam pyruvate kinase 80 548 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 PANTHER PYRUVATE KINASE 70 526 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops1g01951 550 SUPERFAMILY PK C-terminal domain-like 397 548 IPR036918 -
Rops1g01951 550 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 77 413 IPR015813 GO:0003824
Rops1g01951 550 SUPERFAMILY PK beta-barrel domain-like 148 239 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01951 Rops-Chr1 39586363 39592877 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01951 K00873 - gmx:100776984 868.226