Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01942 ATGGTCCCTAAAATTCATGGTGTAGAAATGGCAATGGCCAATGAGAATGAGAATATTGAGAATGGCAGAATCACTGGGAACTGGAAAAAACGTATGCATGTTTTTGATGAGAGGCTGAGGAGATTTCCTTGTATGGCTTGGGAGACTACATGGAAGGTGGGACGTGAAGACCCAAGAAGGGTGATCCATGCATTCAAAGTGGGTTTGTCTCTGACCCTTGTGTCTTTGCTGTATCTGTTGGAACCACTGTTCAATGGGATTGGACAAAGTGCAATTTGGGCTGTCATGACTGTGGTTGTTGTGCTTGAATTCACCGCAGGGGCAACTTTATGCAAAGGGCTCAACAGAGGATTGGGGACACTGTTAGCTGGGTTGTTAGCATTTGTTATTGGGTATATTGCAAAAGCATCTGGTCGGGTCTATCGAGCTGTTTTCATAGGCGCTGCTGTTTTTCTTATAGGAACTATGGCTACTTATATGAGGTTCATTCCCTATATAAAAAAAAACTATGACTATGGTATAGTTATATTTCTCTTGACTTTCAACCTTATTACTGTGTCGAGCTACCGGGTTGATGATGTCATGAAGATTGCACATGACCGTGTATACTCCATTGCCATAGGCTGTGCCATTTGCCTTATGATGAGTCTACTGGTGTTTCCAAATTGGTCAGGGGAAGACCTCCATAATTCCACTGTGTTTAAGCTTGAAGGTCTTGCCAAATCAATTGAGGCTTGTGTCAATGAATACTTTTATGGAGAAGTTGAAGCCTCTAGAGATATCAAGTTGTCCGAGGATCCCATATACAAAGGTTACAAGGCTGTTTTGGATTCAAAATCCACCGATGAAACACTGGCATTACATGCAAGTTGGGAGCCGAGGCATTCCAGGTACTGTCACAGATTTCCATGGCAGCAATATGTAAAAGTAGGAGCTGTTCTTCGTCAATTTGGGTATACCGTGGTAGCCTTACATGGCTGTTTGAGAACAGAAATTCAGACACCACAATCTGTTAGAGCCCGATTCAAGGACCCCTGCATAAGGCTTGCAGCAGAAGTATCCAAAGTACTGATAGAACTTGCCAGCAGCATAAGGAATCGCCGCCATTGCTCTCCAGAAATACTCTCAGACCATCTTCATGAAGCACTGCAGGACCTCAACACTGCCATAAAATCTCAACCTCGTCTCTTCTTAGGCCCCAAACACAGGCACAATCAAGCTAACAACATGCTCAAAATAGCTGCTGCACAAGTGGACAAGGAGAGACATGTAAAGACCTCTGGATTTTCCTTATCAAGCGTTAAAACTGACTCTTCAGCATTGCTAGAATGGAAAACCAAAAGGGTATCCACTGAGCATTCAAAGGAAACAGAAAGAAAGTCTTTGAGACCCCAATTGAGTAAAATTGCAATCACTAGCCTTGAGTTCTCTGAGGCTCTTCCTTTTGCTGCCTTTGCTTCTTTGCTTGTGGAAACAGTGGCAAAACTGGACCTTGTCATAGATGAAATTGAAGAACTGGGGAGATTAGCATGCTTCAAAGAATACAGACCTGATGATGATATTATTGTGACTTGTGAGGAACCCCGAGTTGATGTGTTAGAGAACCATTTACCTTCCCATGGAGCAGACTAG 1632 0.432 MVPKIHGVEMAMANENENIENGRITGNWKKRMHVFDERLRRFPCMAWETTWKVGREDPRRVIHAFKVGLSLTLVSLLYLLEPLFNGIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFVIGYIAKASGRVYRAVFIGAAVFLIGTMATYMRFIPYIKKNYDYGIVIFLLTFNLITVSSYRVDDVMKIAHDRVYSIAIGCAICLMMSLLVFPNWSGEDLHNSTVFKLEGLAKSIEACVNEYFYGEVEASRDIKLSEDPIYKGYKAVLDSKSTDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPQSVRARFKDPCIRLAAEVSKVLIELASSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHRHNQANNMLKIAAAQVDKERHVKTSGFSLSSVKTDSSALLEWKTKRVSTEHSKETERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIDEIEELGRLACFKEYRPDDDIIVTCEEPRVDVLENHLPSHGAD* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01942 543 Pfam Aluminium activated malate transporter 51 507 IPR020966 GO:0015743
Rops1g01942 543 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 43 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01942 Rops-Chr1 39506298 39509899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01942 37 528 Miscellaneous Gene Families AT4G17970 65.784 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01942 K25841 - gmx:100788625 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01942 1 39506298 39509899 Rops1g01942 1 39506298 39509899 ECH