Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01937 ATGGCTGCGTCGACGGAGTTGTTAGAAACATTAGGGAATTTGGAGAGGGATTCCTTCGTGTCACTTCTATCGAAGCTGATTGGGGAATCGAAACACGTGCAAAACAACCCGCCGGAACTGATTCCGGAAGAAGACAGGGTGGTGAAGCACGTGTTGGATGTCCTCCAACCGTTGAGCACCACCACCGGCGGTGGCCCCTTGATCCTCAACCACGTCACCTATTTCCCCGGCAGAGGGAACCTCATCGTCGAGTACCCTGGAACCGTACCGGGGAAGATTCTCTCCTTCGTCGGTTGCCACATGGATGTCGTAACTGCCGATCCCAACGGTTGGGATTTTGATCCGTTTACTTTGAGCATCGATGGGGATAAACTCAGGGGTCGTGGAACTACTGATTGTTTGGGACACGTGGCACTTGTCACTGAACTCATGAGGAAGCTTGGGGAAACTAAGCCTAATTTGAAATCAACTGTTGTTGCTGTTTTCATAGCCAATGAAGAGAATTCAGAAATAACTGGAGTTGGTGTTGATGCTCTTGTCAAAGATGGCCTCCTCAACAAGCTCAAGCAAGGCCCACTGTTTTGGATTGACACGGCAGATAAACAACCATGTGTAGGCACTGGTGGTATGATACCTTGGAAACTTCATGTCACAGGGAAGCTCTTTCACAGTGGATTAGCTCACAAGGCTATAAATCCTCTGGAGCTAGCCATGGATGCTATAAAGGAAATCCAGTCGCGATTTTACAGAGACTTCCCACCTCATCCTCAGGAACAGGTTTATGGGTTTGCAACCCCTTCAACCATGAAACCAACCCAATGGAGCTATCCTGGAGGTGGAATCAACCAAATTCCTGGGGAATGCACTATTTCAGGAGATGTCAGGTTAACTCCATTCTACAATGTGAAGGACGTAATGAAGAAACTGCAAGAATATGTGGATGATATTAATGACAATATGCAGAAGCTAGAAACACGGGGTCCAGTTTCAAAATATGTCCTACCTGATGAAAACTTAAGTGGAAGCCTTACTCTAACTTTCGATGAGGCAAATTCTGGAGTTGCTTGTGATCTTAATTCTAGAGGTTTCCATGTTTTATGCAAAGCAACTGAGGAAGTAGTTGGGCATGTAAAGCCTTACTCGATTACTGGGACTTTGCCTCTCATTCGTGAACTTCAGGATGAAGGTTTTGATGTTCAAACTTCTGGCTATGGTCTAATGGCAACTTATCATGCCAAGAATGAGTACTGTCTTTTTACAGATATGTCCCAAGGATATCGGGTGTTCACTAGCATCATTGCTCAATTGGAAGATTAA 1317 0.4563 MAASTELLETLGNLERDSFVSLLSKLIGESKHVQNNPPELIPEEDRVVKHVLDVLQPLSTTTGGGPLILNHVTYFPGRGNLIVEYPGTVPGKILSFVGCHMDVVTADPNGWDFDPFTLSIDGDKLRGRGTTDCLGHVALVTELMRKLGETKPNLKSTVVAVFIANEENSEITGVGVDALVKDGLLNKLKQGPLFWIDTADKQPCVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAIKEIQSRFYRDFPPHPQEQVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVDDINDNMQKLETRGPVSKYVLPDENLSGSLTLTFDEANSGVACDLNSRGFHVLCKATEEVVGHVKPYSITGTLPLIRELQDEGFDVQTSGYGLMATYHAKNEYCLFTDMSQGYRVFTSIIAQLED* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01937 438 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 319 IPR036264 -
Rops1g01937 438 Coils Coil 306 326 - -
Rops1g01937 438 CDD M20_ArgE-related 14 436 - -
Rops1g01937 438 FunFam Acetylornithine deacetylase, putative 13 204 - -
Rops1g01937 438 Gene3D Zn peptidases 8 192 - -
Rops1g01937 438 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Rops1g01937 438 Gene3D - 209 325 - -
Rops1g01937 438 Pfam Peptidase dimerisation domain 206 317 IPR011650 -
Rops1g01937 438 SUPERFAMILY Zn-dependent exopeptidases 14 436 - -
Rops1g01937 438 FunFam Peptidase M20/M25/M40 family protein 209 324 - -
Rops1g01937 438 PANTHER ACETYLORNITHINE DEACETYLASE 1 437 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01937 K01438 - gmx:100814676 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01937 1 39373866 39378849 Rops1g01937 1 39373866 39378849 ECH