Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01936 ATGGAGCTTTCTCTAACACTGACCCACAACCCTTCAACTTCATCGCTTCCAGCTGCACTTGCTCACTGCTCCAAGATATGTGAATTTCAACCAAGGAAGAAGAGGGTGCCCTTCTTTGACGCTTCTAGACTTTCACTGCGTTGTGTTAAGGCTTCAGCTGAGCGAACCGGTGATACCATCGACGACCGGGAGAGTCGAACCGGGTTCACCAACCCTGCTGTGGAGGTCACCACATTCAATCGCAGTTTCAATGATGCTGACTTCCCCGTCTGGGAAAAGATTGGTGCTGTTGTTAGACTCAGCTATGGCATCGGGATTTATGGTGCCATGGCTGTTGCGGGGAGTTTTATATGCTCAATCACTGGAATTGACTCTCTCGGGGGTTTCCATCTATCATTAGATGCCATTCTGGAAGGGCTTGGATATGCAGCTCCTCCAATTATGGCTCTTCTGTTTATACTTGATGATGAAGTGGTGAAGCTATCACCCCATGCCCGTGCCATCAGAGATGTAGAGGATGAAGAACTTTGGAGTTTTTTCTACGGGATGTCCCCTTGGCAGTTTATACTGATGGTTGCTGCAAGTTCAGTGGGAGAGGAGCTCTTCTACAGGGCTGCTGTACAGGGGGCATTGGCTGATATATTTTTACGAGGCAGTAATCTTATAACAGATGCTCAAGGAATGGCGTCTTTGATAGGGGTATTGCCTCCATTTGTTCCATTTGCTCAGGCATTTGCAGCTGTACTCACAGCTGTCCTGACTGGTTCTCTTTATTATGTTGCTGCTTCTCCTAAAGATCCTACTTATGTTGTTGCACCTGTTTTACAATCTCGGTCAGGTCGTCAAGATTTGAAAAAGCTGTTTGAAGCCTGGTATGAGAAACGACAAATGAGAAAAATCTATTCCCCACTTCTGGAAGGACTGCTGGCCCTTTACCTAGGTTTTGAGTGGATCCAGACAAATAATATTCTTGCTCCCATTATCACACATGGCATATACTCCACTGTCATATTGGGACATGGCCTTTGGAAGATACACGACCACCGACGGAAACTACGTCAAAGAATCCAACAGCTCAAATTAGAAGAGAAAAATTCCAAGTAG 1104 0.4601 MELSLTLTHNPSTSSLPAALAHCSKICEFQPRKKRVPFFDASRLSLRCVKASAERTGDTIDDRESRTGFTNPAVEVTTFNRSFNDADFPVWEKIGAVVRLSYGIGIYGAMAVAGSFICSITGIDSLGGFHLSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELWSFFYGMSPWQFILMVAASSVGEELFYRAAVQGALADIFLRGSNLITDAQGMASLIGVLPPFVPFAQAFAAVLTAVLTGSLYYVAASPKDPTYVVAPVLQSRSGRQDLKKLFEAWYEKRQMRKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSTVILGHGLWKIHDHRRKLRQRIQQLKLEEKNSK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01936 367 Pfam Type II CAAX prenyl endopeptidase Rce1-like 185 335 IPR003675 GO:0004222|GO:0016020|GO:0071586
Rops1g01936 367 Coils Coil 349 367 - -
Rops1g01936 367 PANTHER OS03G0100030 PROTEIN 11 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01936 Rops-Chr1 39370155 39373601 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01936 - - pvu:PHAVU_002G007300g 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01936 1 39370155 39373601 Rops1g01936 1 39370155 39373601 ECH