Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01809 ATGAAGAACACCAATGGTAACACAAAACTCATCCTCCTCCACCCTTATATCCAAAAACAAGGAAGCTCAAATCGTCTATGGCTTCTAGCCTTCATATCATTCTTCACATTGGCCTTCCTTGCCACCCTCATTTACACAAGAGAATCCACCTCTGCCACCTCCACCACTGCATCTAGCATTTCCTCCTCTTCTCCTATATCAGGGTTCACCAGCACCCCTTTACCTTCCATTGTAATCAACACCCTCGTCCATTATGCCTCAAAATCCAATGACACCTTCCATATGCCCTACTCAGACATCAAACCCATCTCTGATGTGTTAAGAAAATGCTCATCACCATGCAATTTCCTTATCTTTGGCCTCACCCCTGAGACCCTCCTTTGGAAGACACTGAACCACAATGGAAGAACAGTTTTCATCGATGAAAACCGTTACTACGCTGCATATATTGAAGAAAAGCACCCTGAGATCGATGCCTATGATGTGCAGTACACCACCAAGAGGAGTGAAATGAAGGAGCTCATAGCTTTGGCTAAAGAACAGGCAGGAAATGAGTGCAAACCAGTGCAGAATCTTCTGTTTTCAGAGTGCAAGTTAGGAATTAATGATCTTCCGAACCATGTTTATGATGTGAATTGGGATGTCATATTGGTGGATGGACCAAGGGGTGATTGGCCTGATGCTCCCGGAAGAATGTCGGCGATCTTCACCGCCGGCGTGTTAGCCAGGAGCAAGAAGGGTGGGAATCCAAAGACACATGTGTTTGTGCATGACTTCTGTGGAAAAGTGGAAAAGGTTTGTGGGAATGAGTTTCTGTGCAAAGACAATTTAGTGGAGGCAACTGAGACTTTGGGACACTATGTGCTGGAAAAAATGGATGAGAGTAGTGTCCAGTATTGTAAGAATCATTCATCATCATCATCAAGGGCTGCTTCATCATCCTAG 945 0.4476 MKNTNGNTKLILLHPYIQKQGSSNRLWLLAFISFFTLAFLATLIYTRESTSATSTTASSISSSSPISGFTSTPLPSIVINTLVHYASKSNDTFHMPYSDIKPISDVLRKCSSPCNFLIFGLTPETLLWKTLNHNGRTVFIDENRYYAAYIEEKHPEIDAYDVQYTTKRSEMKELIALAKEQAGNECKPVQNLLFSECKLGINDLPNHVYDVNWDVILVDGPRGDWPDAPGRMSAIFTAGVLARSKKGGNPKTHVFVHDFCGKVEKVCGNEFLCKDNLVEATETLGHYVLEKMDESSVQYCKNHSSSSSRAASSS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01809 314 PANTHER OS11G0490100 PROTEIN 9 301 IPR006514 GO:0045492
Rops1g01809 314 Pfam Polysaccharide biosynthesis 99 286 - -
Rops1g01809 314 NCBIfam TIGR01627 domain 74 300 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01809 Rops-Chr1 37300638 37302038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01809 - - gmx:100803555 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01809 1 37300638 37302038 Rops2g04502 2 82230591 82231856 ECH
Rops1g01809 1 37300638 37302038 Rops1g01809 1 37300638 37302038 ECH
Rops1g01809 1 37300638 37302038 Rops2g04502 2 82230591 82231856 PCT