Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01729 ATGCCCGCTCTGAGAAAGCGAACCCGAACAGCCACTGACAACACAGCTGATCCTGTGACTGCTGCGAGCCATGATCAACAGAAAATATCTCAGTACGAGCTATCAAGAGAACAAAGAATCCGAGAAAACCGTGAGAGAATGGGAAAGTTGGGCATTTTCGACCTTTCTCTTAACCTCAAGATCAAAACCCACCCACCACCTTCAAGGCGCACTCCATCTTCCAACCACAAAACCACTCCTCCTCTGCACCCCTCTGGCCCCGTTCGCCGATCTTCCAGATTGCAGAATGCGGCTCCTGTTAGTTACTCCGAAGCGCCTGCCAAGAAAGCTGAGTTTTTGGAAAATAGAAAGGTTGTGATAGAAGAAGGTTCCAAGCCTGAGGTCTATACTGAAGAACATGAGAAACTTCTGGGTAACACCCAGAAAACTTGGACACTCTTCGTCGATGGTTGTGGGAAAGATGGGAAACGAATTTACGATTCTGTCCAAGGGAAAACTTGCCATCAGTGCAGGCAAAAAACTCTTGGTTATCGTACACGCTGTTGCAAATGCAACATGGTCCAGGGGCAGTTTTGTGGAGATTGCTTGTACATGAGATATGGGGAGCATGTACTTGAAGCCTTGCAGAATTCAACTTGGATATGCCCTGTTTGTCGTGGAATTTGCAACTGTAGCTTATGCCGTCAAGCAAAAGGATGGGCTCCTACTGGCCCACTATATAAAAAGATATCAGCACTGGGTTACAAATCAGTTGCACACTACCTCATTCAAACCCGGCGCTCAGATAAAGATGAGAAAAATGCAGATGCTTCTAACCCAGTTTCAGCAAAAAGGTCGTTACCTTTCTCTGATGAGGACATCAATAAGTCTAATGGGGTCAATGAGAATAATCTTGGATCATTGAAGCCTCTAGCTGAAACTGAAAGTGATGAAATTTCGGCTAAGAGGTTGCTTTTCCCTGATGAGCAAGATCAGCCTGAAAAAGTTGTGGGTTCCGTTGCCATGAAGCAAATCCAACTTGAAAAGGTTGAGTGTTCGGATACCATGAAGCCACTTGCTTCTTCCTCCAAACCTTGCTCAGACAGCATTGCTGGAAGACTTAGGTCTAGGCTCAAAAAATCATGA 1125 0.456 MPALRKRTRTATDNTADPVTAASHDQQKISQYELSREQRIRENRERMGKLGIFDLSLNLKIKTHPPPSRRTPSSNHKTTPPLHPSGPVRRSSRLQNAAPVSYSEAPAKKAEFLENRKVVIEEGSKPEVYTEEHEKLLGNTQKTWTLFVDGCGKDGKRIYDSVQGKTCHQCRQKTLGYRTRCCKCNMVQGQFCGDCLYMRYGEHVLEALQNSTWICPVCRGICNCSLCRQAKGWAPTGPLYKKISALGYKSVAHYLIQTRRSDKDEKNADASNPVSAKRSLPFSDEDINKSNGVNENNLGSLKPLAETESDEISAKRLLFPDEQDQPEKVVGSVAMKQIQLEKVECSDTMKPLASSSKPCSDSIAGRLRSRLKKS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01729 374 MobiDBLite consensus disorder prediction 349 374 - -
Rops1g01729 374 MobiDBLite consensus disorder prediction 13 29 - -
Rops1g01729 374 MobiDBLite consensus disorder prediction 285 302 - -
Rops1g01729 374 PANTHER OS05G0300700 PROTEIN 24 347 IPR040221 GO:0006355
Rops1g01729 374 MobiDBLite consensus disorder prediction 67 81 - -
Rops1g01729 374 MobiDBLite consensus disorder prediction 262 302 - -
Rops1g01729 374 MobiDBLite consensus disorder prediction 61 101 - -
Rops1g01729 374 MobiDBLite consensus disorder prediction 1 35 - -
Rops1g01729 374 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 159 255 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01729 Rops-Chr1 36104146 36108163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01729 K23408 - gmx:100791534 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01729 1 36104146 36108163 Rops1g01729 1 36104146 36108163 ECH