Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01709 ATGGCAGATATTAGGCTTACCAAGGTGGAGAAAGGTCAAACCAAGATTAAAAATGTTCCAATAGCTGTCACCCCTGAAGGATTTTGGTGTTGCCCTTCCCCTGTTGTGTTTCAGAAAAGCCTGAAGGCTCAAAATCCTCTAAATAAACCCAAACCCTCTCCCCCACCTCCAAACACTAGTGTCCAGAAAAAACCAGTCTCAGTGAGTGAGAAAAGAGCAGTACCTGCCCCATCAAGATTGGTGGTTTCAGATGTTCAGCAAAGCAATGATCAAGAAAGACCTCCAGCTAGCACATCTGGGGCTACAGAGAAAGCTCCCAGACCCAAAATTGAAACTTTGCCCAAAAAGGTGGCTATTGAGTTTGGTGAGCCTGGAACTTGTGACATGAAGGTGGTTCTCCTGGGAAAGCAGGGGTTTTGTATGAAGTTAAGTGTGCATAGGGATGTTCTAACAGAGAAGAGTAGTTTCTTTGCTGATAAACTTTCTGAACAATCTGGTTTGTCATGTCTCCAAATTGATGATTGTGAGGATGTTGAAATATATGTTGAAACTGTTGGGCTTATGTACTGCCAAGAAATGAAACAGCGGCTTATGAAGCAAAGTGTTTCTCGCATTCTTAGAATAATCAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGTATCCAATCATGTTTGGAGCACTTGGAGGCAGTCCCCTGGATTGGAGAAGAAGAAGAAAAGGTCATCTCAACTATACTGCGACTCCAAGGAGAAGGAATTGGGGTCAACCCTGTACTGAAACGAGTTTCTTCTGATATTTCTAATGCCCCAAAAGAAACACTATCCCACATTTTTGAACTTGTTCTCAAAAGCAATGAGGAGAGAGGTCGTCGAGAGATGAAGTCCATAGTTCTAAAGCTCCTTAGGGAGAATAACAGTATTCCAAGCTCTGCAGCTTCAGATGACATCTGTAATGACATGATTTATAGATCATGCAGAAGCTGTTTAGATTCTTTATTGTCTCTGTTCAACCAGGCTTCAGAACCAGACTTTGCAGACTCACCTAGCGATACCAGAGAACCTGTTGTAAAACATATAGCTCTTGAAGCAGATAACTTGTCATGGTTGCTTGAGATTTTGGTTGACAAACAAGCTGCTGATGAGTTCGCACTGATGTGGGCAAACCAGCAGGAATTGGCTGCTCTACATGGAAAACTGCCTATTGTATTTCGATATCATGTCAGCTGCATTTCAGGAAGACTATATGTTGGCATTGGAAGAGGGGAGCTTTTGCCATCAAAGAACACGCGCCAGTTGTTGTTGCAGACATGGCTACAACCTCTAATCAATGACTACAACTGGTTACAGCATGGATGCAGGTCATTTGATAGGAAACTTGTGGAGGAAGGAATTGGAAGGACAATTCTCACCTTGCCTTTGGAGGATCAACAGAGTATCTTGCTTTCTTGGGTTGGAAGTTTCTTGAAAACAGGTGATGGCTGTCCCAATTTGCAGAGAGCTTTCGAGGTTTGGTGGCGGAGAACTTTCATTAGACCATATGTGGAAGGCCAAGGTAATGTCATGCCAGATGGTTGA 1575 0.4317 MADIRLTKVEKGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKAQNPLNKPKPSPPPPNTSVQKKPVSVSEKRAVPAPSRLVVSDVQQSNDQERPPASTSGATEKAPRPKIETLPKKVAIEFGEPGTCDMKVVLLGKQGFCMKLSVHRDVLTEKSSFFADKLSEQSGLSCLQIDDCEDVEIYVETVGLMYCQEMKQRLMKQSVSRILRIIKVAEFLGFSSCIQSCLEHLEAVPWIGEEEEKVISTILRLQGEGIGVNPVLKRVSSDISNAPKETLSHIFELVLKSNEERGRREMKSIVLKLLRENNSIPSSAASDDICNDMIYRSCRSCLDSLLSLFNQASEPDFADSPSDTREPVVKHIALEADNLSWLLEILVDKQAADEFALMWANQQELAALHGKLPIVFRYHVSCISGRLYVGIGRGELLPSKNTRQLLLQTWLQPLINDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEGQGNVMPDG* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01709 524 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 116 517 IPR038920 -
Rops1g01709 524 MobiDBLite consensus disorder prediction 81 98 - -
Rops1g01709 524 Gene3D Potassium Channel Kv1.1; Chain A 121 241 IPR011333 -
Rops1g01709 524 MobiDBLite consensus disorder prediction 44 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01709 Rops-Chr1 35869282 35873795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01709 - - gmx:100818853 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01709 1 35869282 35873795 Rops1g01709 1 35869282 35873795 ECH
Rops1g01709 1 35869282 35873795 Rops2g03420 2 62872550 62877389 PCT