Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01677 ATGCTATCTGGCATTCTCTCAAAGCTGAATGCTACCGTTTACTGTCGCATTCAGGAAGCAGTAACACGGCAACAAGGAGTTCCAACATCCTTGTACAGAAAAAATCCAGCTTTGTCTCTTTCTTCACTGCATTCAACTTCCTTTTTCCTTGGTTCCACTCGTTGCTCTTCAAGCCACAAGCTTAATAGAAAATCAATGGCTACTTCACCTTCCAATGCTGTGTTGGGAGATGTTTATGTTGATGACCTAATCTCAAGTTGTGGTGGTGTGTCGGACTTCACAAAGCCAGCTGGTGTATACTTCAAAAACAGAACTCATAAAGGTTGCCTGAGAGCCAGTTTGAATCTAAGAAGACCACAATCTTTGTATGGTCCTCTGTGTTTTGCGTGTTCCACTTTTGATGCTAATCGGAGGATCAGGAATTCAAGTTTGCTTCATGGACCTTGGCTGAAGAATTTCTCTACCTCTCATTCTGCTTGCTGCTCTGCTGGGGCTGCACATGATGTCTTATTTGATGGCAGCCATCCTGATGAACAGCTTGCAAATTCCTCTATTTCGCCTGACATAACTACTGTCAATAGCAAGACCTTGAAGATGTCTTCAGGGTCATGCTACCTACCACATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTCATTTGCACAGATGAACAAGCAATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTCGGTGTTAATGCAGGACTATTTGCCCAGGAACTTGTATTCAATTCAGTGAGAGCAGTTCAAGAGGAGCCCAGAGGTTCTTTTAATCCAGCAAAGGTGTTAGAGAAGGCTCACTCAAATACAAAGGCCAAGGGTTCCTCAACAGCTTGTATCATTGGTCTCACCGATAAGGGACTACATGCCATTAATTTGGGTGACAGTGGATTCATTGTGATTAGAGGTGGATGCACCATTTTCAAGTCCCCTATTCAACAGCACGACTTCAACTTCACATATCAATTGGAGAGCGGTAATGGAGGTGATCTACCCAGCTCTGGTGAGGTTTTTTCAATACCTGTTGCCCCAGGAGATGTCATAGTTGCTGCAACAGATGGATTATTTGACAATTTGTACAATAACGAGATCACTGCAGTGGTTGTACAAGCAGTTAGAGCTAGACTAGAACCTCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGACAGCGAGCACTGGACAAGAACAGGCAGACACCATTTTCAACTGCTGCTCAGGAGGCTGGATTTCGTTTTTATGGTGGCAAACTCGATGACATAACAGTTGTTGTGTCATACATATGCGGCTCAATTAGTGAGTGA 1338 0.4439 MLSGILSKLNATVYCRIQEAVTRQQGVPTSLYRKNPALSLSSLHSTSFFLGSTRCSSSHKLNRKSMATSPSNAVLGDVYVDDLISSCGGVSDFTKPAGVYFKNRTHKGCLRASLNLRRPQSLYGPLCFACSTFDANRRIRNSSLLHGPWLKNFSTSHSACCSAGAAHDVLFDGSHPDEQLANSSISPDITTVNSKTLKMSSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFAQELVFNSVRAVQEEPRGSFNPAKVLEKAHSNTKAKGSSTACIIGLTDKGLHAINLGDSGFIVIRGGCTIFKSPIQQHDFNFTYQLESGNGGDLPSSGEVFSIPVAPGDVIVAATDGLFDNLYNNEITAVVVQAVRARLEPQVTAQKIAALARQRALDKNRQTPFSTAAQEAGFRFYGGKLDDITVVVSYICGSISE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01677 445 PANTHER PROTEIN PHOSPHATASE 2C 179 440 IPR039123 -
Rops1g01677 445 Gene3D - 189 336 IPR036457 -
Rops1g01677 445 SMART PP2C_SIG_2 199 439 IPR001932 -
Rops1g01677 445 FunFam 5-azacytidine resistance protein azr1 208 333 - -
Rops1g01677 445 Pfam Stage II sporulation protein E (SpoIIE) 227 436 IPR001932 -
Rops1g01677 445 Gene3D - 342 442 IPR036457 -
Rops1g01677 445 ProSiteProfiles PPM-type phosphatase domain profile. 200 439 IPR001932 -
Rops1g01677 445 SMART PP2C_4 190 437 IPR001932 -
Rops1g01677 445 SUPERFAMILY PP2C-like 203 436 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01677 Rops-Chr1 35389341 35393755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01677 K17508 - gmx:100785804 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01677 1 35389341 35393755 Rops1g01677 1 35389341 35393755 ECH
Rops2g03386 2 62306666 62311498 Rops1g01677 1 35389341 35393755 ECH
Rops1g01677 1 35389341 35393755 Rops2g03386 2 62306666 62311498 PCT