Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01628 ATGGCAGAGAAGAGCAAAATCCTAGTCCTTGGAGGCACAGGTTACATTGGAAAATTCATAGTTGAGGCAAGCGCAAAAGCAGGACACCCCACGTTTGCTTTGGTCAGGGAGAGCACAGTTTCTCATCCTGAAAAGTCAAAGCTCATTGAGAGCTTCAAGAGTTCCGGAGTTACCCTGCTCTATGGTGATCTAACTGATCATGAAAGCCTTGTTAAGGCAATCAAGCAAGTTGATGTTGTAATCTCTACTCTAGGTGGAGCACAAATAGATGACCAAGTCAAGCTCATAGCAGCAATTAAAGAAGCAGGAAACATCAAGAGGTTCCTCCCATCTGAATTTGGGTTCGATGTGGACCGACACCATGCAGTTGAGCCAGTAGCCAGCTTTTTTGAGAAAAAAGTGAAAATCCGGAGGGCAGTTGAAGCTTCAGGAATTCCTTACACTTATGTCTGTTCTAATGCCTTTGCTGGATACTTCTTACCTACACTTGGACAACAAAATGTCACTGCTCCTCCCAGGGATAAGGTAGTCATTCTTGGAGATGGAAATGTCAAAGTGATTTATGTCAAGGAGGAAGACATTGGGGCTTATACCATCAAAGCAGTGGAGGACCCAAGAACCTTGAACAAAATTCTGTATGTGAGACCCCCTGCCAATGTTTTGACTTTCAACGAGGTCGTTTCCTTGTGGGAGAACAAGATTAAGAGCACCCTTCAGAAAATTTATCTTCCAGAGGATCAAATTCTCAAGAGTATCCAGGAGTCTCCTTTCCCTGCCAACTTGATGTTGGCATTAGGCCATTCAATGCTGGTAAAGGGGGATTGTGCAAACTTTGAGATTCACCCTTCTTTCGGTTTGGAAGCTTCTGAACTTTATCCTGATGTGAAATACACTACTGTCGACAACTATCTGAATCCATTTGTCTGA 927 0.4358 MAEKSKILVLGGTGYIGKFIVEASAKAGHPTFALVRESTVSHPEKSKLIESFKSSGVTLLYGDLTDHESLVKAIKQVDVVISTLGGAQIDDQVKLIAAIKEAGNIKRFLPSEFGFDVDRHHAVEPVASFFEKKVKIRRAVEASGIPYTYVCSNAFAGYFLPTLGQQNVTAPPRDKVVILGDGNVKVIYVKEEDIGAYTIKAVEDPRTLNKILYVRPPANVLTFNEVVSLWENKIKSTLQKIYLPEDQILKSIQESPFPANLMLALGHSMLVKGDCANFEIHPSFGLEASELYPDVKYTTVDNYLNPFV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01628 308 Gene3D - 6 294 - -
Rops1g01628 308 CDD PCBER_SDR_a 6 301 IPR045312 GO:0016491
Rops1g01628 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 269 IPR036291 -
Rops1g01628 308 PANTHER PINORESINOL REDUCTASE-RELATED 3 308 - -
Rops1g01628 308 FunFam Bifunctional pinoresinol-lariciresinol reductase 1 6 170 - -
Rops1g01628 308 Gene3D - 154 304 - -
Rops1g01628 308 Pfam NmrA-like family 7 297 IPR008030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01628 Rops-Chr1 34630760 34632734 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01628 K23050 - gmx:100780246 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01628 1 34630760 34632734 Rops1g01628 1 34630760 34632734 ECH