Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01626 ATGGCAACTGAAAACAGAATCCTCGTCCTCGGACCAACAGGTGCCATTGGAAGGCACATAGTGTGGGCAAGTGTAAAAGCAGGAAACCCCACATTTGCATTGGTGAGGAAGACCCCTGGCAATGTTAACAAGCCTAAGCTCATCACAGCTGCTAATCCTGACAGCAAGGAACAGCTCATTGAGAATTTCAAAAGTTCCGGAGTTACTCTCCTTGAGGGTGATATCAGTGATCATGAAAGTCTTGTTAAGGCAATCAAGCAAGTTGATGTTGTAATCTGCGCATTTGGTAGACTACTAATTGAGGACCAGGTGAAGGTCATAGCAGCAATCAAAGAAGCTGGAAATGTCAAGAGATTCTTCCCATCTGAATTTGGGCTAGATGTGGACCGTCACGATGCAGTTGATCCACTTAGAGAAGTTTTCGAGGAAAAAGCCAAAATCCGAAGAGTTATTGAAGCTGAAGGGATTCCTTACACTTACCTCTGCTGCCATGCCTTTACTGGTTACTTCTTACGTAACTTGGCACAACATGATGCCACTGTTCCTCCTCGGGACAAGGTAGTCATTCTAGGAGATGGAAATGTCAAAGGAGCTTATGTGACTGAGGCTGACGTGGGGACTTATACCATCAAAGCAGCGAATGACCCCAGAACGTTGAACAAAGCCGTCCACATTAGACTCCCTGCCAATTATTTGACCGCAAATGAGATCATCTCCATGTGGGAGAAAAAGATTGGGAAGACTCTTGAGAAAACTTATGCTTCAGAGGAAAAGGTTCTTAAGGACATCCAGGAGTCTCCTTTCCCTCACAACTACCTGTTGGCGTTGTACCACTCACAGCAGATAAAGGGAGATGCAGTGTATGAGATTGACCCTGCCAAAGACGTTGAGGCTTCCGAGTTTTATCCTGACGTGAAATACACCACAGCCGACGAATATTTGAATCAATGTCTTGATGCCAAGAAAGCCTTACTTCCTGGTGAACATATTCAGAGCTCACCAATAGTTATAGTTCTGTTTCACCAATTACAGAACATGGACTTTTGTCAAGATCGTGGTTGGATGTATGATAGACTTTTACCGGGTAGAAGGGGCTTGACTGATTGTTTTATGAATGGGGTGGAAGAGTTTGTTAAATTTGCATGTGAACATCAACAATTTATGTCTGGAAATCAAATTAGATGTCCTTGTTTCAAGTGCAAAAACCAAAAATTCTTGGATGTTGAGAATGTTAAGCTTCATCTTTATCGAAAAGGATTTAGGCCTGATTATTATTGTTGGACCAGCCATGGAGAAGAATGGTCTACTTCAAGGGCAGGCCCTTCAACATCCGTACAAATGCCTAGGCATGATGAAGTAAATAGATTCGAGGCTATGATTTATGATGTTGCTGGTGTAGAGTTTAAGAGTAGGCTCAATGAACAAGTGGTGGAAGAACCTCCAAACTTAGATGCCCAAAAGAGGATTTAG 1470 0.4299 MATENRILVLGPTGAIGRHIVWASVKAGNPTFALVRKTPGNVNKPKLITAANPDSKEQLIENFKSSGVTLLEGDISDHESLVKAIKQVDVVICAFGRLLIEDQVKVIAAIKEAGNVKRFFPSEFGLDVDRHDAVDPLREVFEEKAKIRRVIEAEGIPYTYLCCHAFTGYFLRNLAQHDATVPPRDKVVILGDGNVKGAYVTEADVGTYTIKAANDPRTLNKAVHIRLPANYLTANEIISMWEKKIGKTLEKTYASEEKVLKDIQESPFPHNYLLALYHSQQIKGDAVYEIDPAKDVEASEFYPDVKYTTADEYLNQCLDAKKALLPGEHIQSSPIVIVLFHQLQNMDFCQDRGWMYDRLLPGRRGLTDCFMNGVEEFVKFACEHQQFMSGNQIRCPCFKCKNQKFLDVENVKLHLYRKGFRPDYYCWTSHGEEWSTSRAGPSTSVQMPRHDEVNRFEAMIYDVAGVEFKSRLNEQVVEEPPNLDAQKRI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01626 489 Pfam NmrA-like family 7 307 IPR008030 -
Rops1g01626 489 Gene3D - 163 314 - -
Rops1g01626 489 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 293 IPR036291 -
Rops1g01626 489 PANTHER PINORESINOL REDUCTASE-RELATED 4 317 - -
Rops1g01626 489 Pfam Transposase-associated domain 352 432 IPR029480 -
Rops1g01626 489 CDD PCBER_SDR_a 6 313 IPR045312 GO:0016491
Rops1g01626 489 Gene3D - 6 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01626 Rops-Chr1 34600922 34620964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01626 K23050 K05281 gmx:100781316 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01626 1 34600922 34620964 Rops1g01626 1 34600922 34620964 ECH