Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01612 ATGAGATCTTCTGTGGGGAGTCTTTCTTCCTCCTTTACAACCGTTCGTTCTGCATCATCATGGTTCGAGGTGTATGCTGCCTTCTCCACATTGATGATGCTTTTAAGAACTGCAGTCAACGATCTCATACCCCAACAAGTTCGATCTTTCATCGTCGCAAAGCTAAAAGCTTTCTTCTCAGACTCCCAACATAATCATCAGGTCTCACTTCAGATTGATCGGTTTTGGGATGGCCAAAGCAACCAGCTCTTCCATGCCGCCAAAGAGTATCTCCCAGCTAGGATAACCCACACTTACAAATCACTCAAAGTGGGCAAACTAGTAAAGGATAAGAACGTACTAGTGGCCGTGGATGGAAAGCAAGAGGTGGTGGATGAATTTGAAGACATCAATCTTAAATGGAAGCTTATTGAAAGCGAGGAGAAGACTGCATTTTTACTAAGCTTTGATGAGAGGCATAGAGACAAAGTGATGAAGAAGTACATTCCACACGTTCTAAGCACTTACCAGACCATGAAAGCAGAGCAGAGGACTATTAAGATCCATTCCTGGTCCCGTGAGCATTGGAAACAAAGTGACCTCACACATCCAGCCTCATTCGATTCACTTGCCCTGGATCCTGAGCTAAAGGAGGCCATCATAGATGATTTAGAAAGGTTTCTGAGGAGGAAGGAGCTCTACAGGAAAGTGGGTAAGCCCAGGAAACGTGGCTACCTATTGTATGGGCCTCCAGGGACTGGGAAATCTAGCCTTATTGCGGCTATGGCCAACTACTTGAAATTTGATGTGTTTGATTTGGAGTTAACCTCTGTGTATTCTAATTCAGACCTCAAGCGAGCCATGAGGGACACATCTAACCAATCCATCATCGTGATCGAAGACATAGACTGCAACATAGAACCAGTTCACTTTGAACATTGGTTCCTAGTGCTGCTAAATCTAGTGTTCGATACAGAAACAACAGTTAAAACAAACAACAGAATGAACATAACTTACAAGTTCCCGTCGTTTAATCTTTATTCCATGAAGTGTCCGAAGGTAGGTAAAGCAAGAAACGAGGGTTGGATGTTTCCAAGTACTACTCGAATGACATTAGAAAGAAAGCAATTTGTCAAAGTCATTCGGAAAGCAATTTCTCTTGGGCTGCTCAAGCCCTTATTTTAG 1164 0.4321 MRSSVGSLSSSFTTVRSASSWFEVYAAFSTLMMLLRTAVNDLIPQQVRSFIVAKLKAFFSDSQHNHQVSLQIDRFWDGQSNQLFHAAKEYLPARITHTYKSLKVGKLVKDKNVLVAVDGKQEVVDEFEDINLKWKLIESEEKTAFLLSFDERHRDKVMKKYIPHVLSTYQTMKAEQRTIKIHSWSREHWKQSDLTHPASFDSLALDPELKEAIIDDLERFLRRKELYRKVGKPRKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELTSVYSNSDLKRAMRDTSNQSIIVIEDIDCNIEPVHFEHWFLVLLNLVFDTETTVKTNNRMNITYKFPSFNLYSMKCPKVGKARNEGWMFPSTTRMTLERKQFVKVIRKAISLGLLKPLF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01612 387 PANTHER BCS1 AAA-TYPE ATPASE 26 302 - -
Rops1g01612 387 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Rops1g01612 387 Pfam ATPase family associated with various cellular activities (AAA) 239 297 IPR003959 GO:0005524|GO:0016887
Rops1g01612 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 298 IPR027417 -
Rops1g01612 387 Gene3D - 188 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01612 Rops-Chr1 34383259 34384422 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01612 - K08900 gmx:100787726 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01612 1 34383259 34384422 Rops1g01612 1 34383259 34384422 ECH