Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01605 ATGCTAAGCTCCAACTCCATAGGGTCACCTCAAACACAAAACGATGAAAGCACCACTACCCGCACGGCCATTGACACCTCTACAACCACCGAGAATGATTTCTCTTCCTCCGAAGACTCCCCTGAAACCACCACCAAAACCACCCAAGACTCAGCTGAAACCACCACCACCAAAAGTGAAGACCAAAAGGATACTGCTACTGCTGTGTTTGGAGACAATCCCGGCAATCTTCCAGAGGATGCTATCAAATCTGATGACAAAAACTCAAAAAATGAGCCCCACAAACAACAAGGTGCCATTAGTGAATCTCAGATATCAGAGGAAAGCTCGTTAACTACAAAAGAACAAGCTTCCACAATACATGAAGAAACAGGTTCAGATAATGATCAGAAAATTTCTGAGTCTGAGAGAGTTCAGGAAAAAAGCATCGAGGCATCTGAAGGAAACAAAAAGGATGGAGAAGAGAATGCAATAGAATCTCAAGATGTAAATGCAGCTAAAAATCAAGAACAAAGCACCGGACAGCAACAAGATGTTCAAAGTTTTGATACTGTAGGGACTAAAAACGATGAAGATGAAGCAAATAAAGAACAATTAAGAGAAGACAAAGTTGAGAATGTGATAACAGAGAAAGATGGAAAGATAAGATCGCATGAAGAGAAACAAGATGAAAATTCTGATTCCAACGCAGCTTTGAAAGGCGAGAGCTCTCAACTCTCTCAGGTAGAGCCAGAGAAAAATGAGAAGGAGAGAGTACAGGATGAAAGTGAAGGAACACAGAAGCCAAAAGCAGAGAAAAATGGCCGCAAGTCAAAGAAGTCATGGTCAACTCAAGCAGATCAGTCGAAGAATGAAAACAAGAGACAGAAGAGTGAATTGGGAAGTGAGGAGAAACTGCAAGACCACGAGTGGTATCTCTGCAATGTCACAGCAGGTGCTGATTATATACCATGTTTGGACAATGAAGAGGCTATTAAAAAGTTACGTACTACAAAACACTTTGAACACAGAGAAAGACATTGTCCTGAGGAGCCACCTACTTGTTTGGTGCCACTTCCTGAAGGTTACAAAAGACCCATCGAATGGTCTAGCAGCAGAGATAAGATATGGTATCACAATGTACCACACGCCTCGCTGGCACAAGTGAAGGGACACCAGAACTGGGTGAAGATGACGGGTGAGTTTTTGACATTCCCTGGAGGTGGCACCCAGTTCATCCATGGAGCTCTACACTACATCGATTTTCTTCAACAGGCCGAATCTGGTATTGCATGGGGAAAGCGCACAAGGGTGGTCTTAGATGTTGGGTGTGGGGTTGGCAGTTTTGGAGGCTTCTTATTCGAAAGAGATGTTATTGCAATGTCTTTTGCACCAAAAGATGAACATGAAGCACAGGTGCAATTTGCCATTGAGAGAGGCATTCCTGCCATATCTGCTGTCATGGGTTCTCAAAGGCTCCCATTCCCCAGCCGTGTGTTTGATCTCGTACATTGTGCACGTTGTCGAGTACCTTGGCATGTAGATGGTGGCATGTTGCTTTTGGAATTGAATCGGGTTTTACGACCAGGTGGTTATTTTGTTTGGTGTGCCACTCCCGTGTACCAGAAGCTTGAAGAAGATGTCGAGATATGGAAGCAAATGACCTCACTAACGAAGGCCATGTGTTGGGAGCTTGTGACTATCAACAAGGATGAACTGAATAAGGTTGGTGCTGCCATTTACCGCAAACCCACTTCCAATGAATGCTACGAACAAAGGGAGCAAAACCAACCTCCAATGTGCAAGGACGATGATGATTCAAATGCTGCCTGGTATGTACCTCTGCAAGCATGCATGCACAGGGTGCCGGAAAACAAGGCTGAGAGAGGAGCCAAATGGCCTGAAGTTTGGCCTCATCGACTGCAGAAAACCCCATATTGGTTAAACGACTCGCAGGTGGGGATCTATGGAAAACCAGCTTCTCAAGACTTTGCAGCAGACAATGAACGTTGGAAAAACGTTGTTGATGAGTTGACCAACATTGGTATAATTTGGTCTCACGTGAGAAATGTCATGGACATGCGAGCAATCTATGGGGGATTTGCAGCAGGTCTGAGGGATCTTCCGGTTTGGGTATTCAATGTGGTGAACATAGATGCTCCAGACACACTTCCCATCATCTATGAGAGGGGTCTTTTTGGGATATACCATGACTGGTGTGAATCCTTCAGCACATATCCACGATCTTATGATCTACTGCATGCAGATAAACTGTTCTCAAAGCTAAAAGAGAGATGCCAACTTATTCCTGTTATGGCAGAGGTGGATAGAATAATAAGACCGGGAGGTAAATTGATTGTCCGTGATGAACCTAGCACCATCAGCGAAGTGGAAGCTTTGTTAAAATCTCTACATTGGGAAATAACCTTAAGTAAAAAACAGGAGGGTATGCTCTGCGCAAAGAGAGGCAAATGGAGGCCTAACACCGTAGTTTCGTCCTGA 2481 0.4434 MLSSNSIGSPQTQNDESTTTRTAIDTSTTTENDFSSSEDSPETTTKTTQDSAETTTTKSEDQKDTATAVFGDNPGNLPEDAIKSDDKNSKNEPHKQQGAISESQISEESSLTTKEQASTIHEETGSDNDQKISESERVQEKSIEASEGNKKDGEENAIESQDVNAAKNQEQSTGQQQDVQSFDTVGTKNDEDEANKEQLREDKVENVITEKDGKIRSHEEKQDENSDSNAALKGESSQLSQVEPEKNEKERVQDESEGTQKPKAEKNGRKSKKSWSTQADQSKNENKRQKSELGSEEKLQDHEWYLCNVTAGADYIPCLDNEEAIKKLRTTKHFEHRERHCPEEPPTCLVPLPEGYKRPIEWSSSRDKIWYHNVPHASLAQVKGHQNWVKMTGEFLTFPGGGTQFIHGALHYIDFLQQAESGIAWGKRTRVVLDVGCGVGSFGGFLFERDVIAMSFAPKDEHEAQVQFAIERGIPAISAVMGSQRLPFPSRVFDLVHCARCRVPWHVDGGMLLLELNRVLRPGGYFVWCATPVYQKLEEDVEIWKQMTSLTKAMCWELVTINKDELNKVGAAIYRKPTSNECYEQREQNQPPMCKDDDDSNAAWYVPLQACMHRVPENKAERGAKWPEVWPHRLQKTPYWLNDSQVGIYGKPASQDFAADNERWKNVVDELTNIGIIWSHVRNVMDMRAIYGGFAAGLRDLPVWVFNVVNIDAPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADKLFSKLKERCQLIPVMAEVDRIIRPGGKLIVRDEPSTISEVEALLKSLHWEITLSKKQEGMLCAKRGKWRPNTVVSS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01605 826 CDD AdoMet_MTases 432 527 - -
Rops1g01605 826 MobiDBLite consensus disorder prediction 242 273 - -
Rops1g01605 826 MobiDBLite consensus disorder prediction 185 228 - -
Rops1g01605 826 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 314 810 IPR004159 GO:0008168
Rops1g01605 826 MobiDBLite consensus disorder prediction 161 184 - -
Rops1g01605 826 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 663 801 IPR029063 -
Rops1g01605 826 MobiDBLite consensus disorder prediction 120 158 - -
Rops1g01605 826 MobiDBLite consensus disorder prediction 1 66 - -
Rops1g01605 826 FunFam probable methyltransferase PMT23 404 588 - -
Rops1g01605 826 Gene3D Vaccinia Virus protein VP39 421 589 IPR029063 -
Rops1g01605 826 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 337 591 IPR029063 -
Rops1g01605 826 MobiDBLite consensus disorder prediction 79 93 - -
Rops1g01605 826 Coils Coil 272 299 - -
Rops1g01605 826 MobiDBLite consensus disorder prediction 94 119 - -
Rops1g01605 826 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 268 819 IPR004159 GO:0008168
Rops1g01605 826 MobiDBLite consensus disorder prediction 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01605 Rops-Chr1 34282341 34285528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01605 - - lang:109333262 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01605 1 34282341 34285528 Rops1g01605 1 34282341 34285528 ECH