Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01474 ATGTCTGTCTTCCAATCCCTTTTATCTTTCTTGGCCGGACCTGCCTCAAAGTCAAAGGCAACCAAATGGTTGCTGGTGGCAAAATTGATGCATAAAGGGGTAATATCATGTGAAGAGAACTTGGGGAATTTCAATGAATTGCAGTCTGTGGAAGCATCTTTAAGTACCCTTCTAAGTGAAGGTACTGATGTTGTGAAGATGCAGGCTGCACATGAAAGATTGGAGGCTTTGGAGAATGCCATTGAAAGCCTAGAAAGTGGTTTGGAGAGTGTATTTAGGCGTTTGGTTAAAACAAGAGTCCACCTTTTGAACGTAGTGACTCAATAG 327 0.422 MSVFQSLLSFLAGPASKSKATKWLLVAKLMHKGVISCEENLGNFNELQSVEASLSTLLSEGTDVVKMQAAHERLEALENAIESLESGLESVFRRLVKTRVHLLNVVTQ* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01474 108 Coils Coil 67 94 - -
Rops1g01474 108 PANTHER OS06G0725500 PROTEIN 1 105 - -
Rops1g01474 108 Pfam Protein BPS1 1 105 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01474 Rops-Chr1 32414033 32414359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01474 - - gmx:100801793 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01474 1 32414033 32414359 Rops1g01474 1 32414033 32414359 ECH