Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01466 ATGGCGACGAGACGATCGGCACAGCTCCTCCTCAAGCACCTATTCCGCGTCAACCCTACCCGCTCCGTCACCTACATGCCCCGACCCGGTGATGGCACCCCACGCTCCGTCACCCTCATCCCTGGCGACGGAATCGGTCCGTTAGTCACCGGCGCGGTAGAACAGGTGATGGAGGCGATGCATGCGCCGGTGTACTTCGAGAAGTATGAGGTGCATGGTGACATGAAAGCTGTGCCTCCAGAGGTGATCGAATCGATCAAGAAGAATAAGGTTTGCTTGAAGGGAGGTTTGGCCACTCCCATGGGCGGTGGTGTCAGCTCACTCAACTTGCAGTTGAGGAAGGAGCTTGATCTCTACGCTTCACTTGTTAACTGCGTCAATCTTCCTGGTTTGCCCACACGTCATGACAACGTTGATATTGTTGTCATTAGGGAGAACACCGAGGGAGAATACGCTGGCCTCGAACACGAGGTCGTTCCCGGCGTCGTTGAAAGCCTCAAGGTGATAACAAAGTTCTGTTCAGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTATCTGAATAACAGAAAGAAGGTGACAGCTGTGCACAAGGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCCACAAAGTATCCTGGAATCAAGTATAATGAAATTATTGTCGATAACTGTTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTAACTCCCAATCTTTATGGCAATCTTGTAGCAAATACAGCAGCAGGTATTGCAGGAGGCACTGGTTTCATGCCAGGAGGTAATGTTGGGGCTGACCATGCAGTGTTTGAACAAGGTGCTTCAGCAGGAAATGTTGGTAACGAAAAAGTAGTGGAACAAAAGAAAGCCAACCCTGTGGCACTCCTCCTTTCGTCGGCCATGATGCTTAGACATCTCCAGTTTCCTGCATTTGCTGACCGATTGGAAACTGCTGTTGAACGAGTCATTCTAGAGGGCAAATACAGGACAAAGGACCTTGGAGGGACAAGCACCACCCAAGAGGTTGTTGATGCAGTGATAGATGCTTTAGATTGA 1095 0.4922 MATRRSAQLLLKHLFRVNPTRSVTYMPRPGDGTPRSVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKYEVHGDMKAVPPEVIESIKKNKVCLKGGLATPMGGGVSSLNLQLRKELDLYASLVNCVNLPGLPTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGFMPGGNVGADHAVFEQGASAGNVGNEKVVEQKKANPVALLLSSAMMLRHLQFPAFADRLETAVERVILEGKYRTKDLGGTSTTQEVVDAVIDALD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01466 364 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 24 363 - -
Rops1g01466 364 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 33 363 - -
Rops1g01466 364 Gene3D Isopropylmalate Dehydrogenase 23 363 - -
Rops1g01466 364 NCBIfam isocitrate dehydrogenase (NAD(+)) 33 362 IPR004434 GO:0006099
Rops1g01466 364 Pfam Isocitrate/isopropylmalate dehydrogenase 37 359 IPR024084 -
Rops1g01466 364 SMART Iso_dh_2 36 359 IPR024084 -
Rops1g01466 364 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 35 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01466 Rops-Chr1 32271512 32275619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01466 K00030 - gmx:100778831 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01466 1 32271512 32275619 Rops1g01466 1 32271512 32275619 ECH