Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01464 ATGGCATCTGGTGAAGGTGATACTGGTGGAATGATGGAAAGTCATGCAGCAGATACTTCAATAGCTGAGGAGCATTTGTCTGATGTGAATCATAAAGATGGAAGCAATGTAAATTTTCTATTGGAAAATGGCTTCTCTGATGGCAATGAAGGTCCAGCTGATGCTCACGATCAGCTTCTACAAATGGTTGTTGACCTCAGATTTCAGAATGAATTCATGAAGTCCCAGTTTGAGGGATTTAGCAATGTAAACAGTATAGCTAATGACTCTAGTATACAGAAAGGAGTTGGTGTTGTGGAAGATAGGGAATCTGACATCGTGAAAGAACTCCAGGAAAGGATAGAATCATTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCCTCTGAAGAGGCTTTGAAGCACCTTCAAACGGCATACTCAGAGGCAGAAGCAAAAGCCCAAGAACTCTCTGAAAAGCTTGTGGAAGCTCAAACGAAGTTGGAACAAGAAATAAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAACGTATTCAAGAGATTCAAAAGGAAAAAGATGATCTTGAGGCACGATTCTCTGAGGTGAATGAAACTGCAGAGCGTGCATCATCCCAACAGTCAGCATTGCAACAAGAGTTAGAGCGCACAAGGAAACAAGCGAACGAGGCATTGAAAGCCATGGATGTTGATAGACAACAATTAAGAAGTGCAAACAACAAACTTCGAGATACCATTGAGGATTTACGGCGTTCTTTGCAACCTAAAGAGAGTGCTCTAGAGGCATTGCAACAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTCCAGGCTGCTGATGAAAAAAGGCAAGCAGCACTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCGTTGTCTGATAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCTAGAATTGCAGAGATGGAGGCAGCATCAACCGGGGAAGCAGTGCGGCTCAAAGCAGCTTTGGAAAGTGTGAAGGGGGAGCTTTCTCACCTAAAACTGGAACATGAAAAAGAAAGGGAAAGCTGGGAGACTTCATCTCAGGCACTTAAAGCTAAACTTGAAATTGCTGAGAGTAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTTGAATCGGAGGTATCTGCACAAGCTAGGATCCTCAGTATGAGAGATGCTGAATTGTTGGCTGCCAAGGAAGAGATCAGCTCTCTTGAGAGGGAATTTTCTTCATACAAGGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCAGAACTGACCGCAGCTAAAGACTCTGAACAACTCAAAGCTCTTGAGGAAGCTCTGAAAGAGGCTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCCATGGCTAATCATGAGAAAGAAATTGCAGAAAGAGACACAGCCCTTGAAAATGCCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAGTGCTCAGCACCTAAAAGAGAAAGAGGAATGGGGACTCAGCCTTCAAAATGTAGAAGAAACATGGAGAATCAGATGTGAGGCAATGAAGGCCGAAAATGAAGCAACTGCTGCAGAAGATATGCAAAAGGAATTAGAAGAGCTCAAACGGCAATGTAAAAAATTGAAGGAGGAGCATACTTCATTTCGTGATCTCGCTGATAGAATGATTGAGGACAAAGACAATGAAATCTCCAAACTTTTAGATGAAAATAAGAATCTTCACCAGTCTCTTCAATCAAATCCACGAGTCGATCAAAATGATAATTATAGCACAGCCTTGCATAAATTGGACTCCACAAATTTAAGTCCCTCAGCTGCAGAACAGCAAATTCTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTGGCACAGTCACAGCGACATATTTTGGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAAAATCGTCTCCACAGCCAACAGGAGGCAATGTTGAAGGCTGAGTTTCGCGACATGGAAAGAGCAAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTTCTTGAGACAGGTGAGGTGGAGGTATTGCTACCAGTTATTGGAATGCTGCTCCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAGGCATATCACAACTCAACAGATGCTCCACCAGGTCCTAATTCTTTTGTTGCTGTTAGAATGTCTGCTCCTGCCATCCAGCTCCAGCGTGCAATTGTTCAATGCAAGTGTTTGGAAGCTGACAGGCTGTAA 2439 0.4186 MASGEGDTGGMMESHAADTSIAEEHLSDVNHKDGSNVNFLLENGFSDGNEGPADAHDQLLQMVVDLRFQNEFMKSQFEGFSNVNSIANDSSIQKGVGVVEDRESDIVKELQERIESLNKEFLEEKQTRIASEEALKHLQTAYSEAEAKAQELSEKLVEAQTKLEQEIKEREEKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNETAERASSQQSALQQELERTRKQANEALKAMDVDRQQLRSANNKLRDTIEDLRRSLQPKESALEALQQSLAEKEQMLEDMRGLLQAADEKRQAALAELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAVRLKAALESVKGELSHLKLEHEKERESWETSSQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSAQARILSMRDAELLAAKEEISSLEREFSSYKVRAHALLQKKDAELTAAKDSEQLKALEEALKEAENEVLSITEERDRVLQDLQSAMANHEKEIAERDTALENAKQQIRSLEIKLDSASAQHLKEKEEWGLSLQNVEETWRIRCEAMKAENEATAAEDMQKELEELKRQCKKLKEEHTSFRDLADRMIEDKDNEISKLLDENKNLHQSLQSNPRVDQNDNYSTALHKLDSTNLSPSAAEQQILILARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAMLKAEFRDMERAKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEMQKCQQAYHNSTDAPPGPNSFVAVRMSAPAIQLQRAIVQCKCLEADRL* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01464 812 Coils Coil 362 421 - -
Rops1g01464 812 Coils Coil 100 127 - -
Rops1g01464 812 Gene3D - 163 314 - -
Rops1g01464 812 Coils Coil 572 609 - -
Rops1g01464 812 MobiDBLite consensus disorder prediction 211 228 - -
Rops1g01464 812 Coils Coil 467 554 - -
Rops1g01464 812 ProSiteProfiles GRIP domain profile. 724 771 IPR000237 -
Rops1g01464 812 Coils Coil 675 716 - -
Rops1g01464 812 Coils Coil 433 460 - -
Rops1g01464 812 MobiDBLite consensus disorder prediction 208 229 - -
Rops1g01464 812 Coils Coil 135 357 - -
Rops1g01464 812 Pfam GRIP domain 728 767 IPR000237 -
Rops1g01464 812 Coils Coil 614 634 - -
Rops1g01464 812 SMART 1grip 727 771 IPR000237 -
Rops1g01464 812 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 115 779 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01464 - - gmx:100775990 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01464 1 32237219 32249787 Rops1g01464 1 32237219 32249787 ECH