Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01457 ATGATGGAGAAGGCAGATTCTGTGCAGAAGCTGTACACGCGCATGCGACTTTGGGAATTTCCGGATCAGTATGTGATTGAGCCAACGGATGGTTCTTCTGGTTCTTGTTTGGCTGTTAGTCGAGTCGATGGTTCTATGAAGCTCATCGATGAGGTTCCAGAATGCAGCTCCGTTCGAGTTCCTAAGATTTTTACAATTTTTGGTGTTGTTGGGATGTTGAGGCTTTTGGCTGGATCATATTTACTGGTTATAACTGAGCGTGAATGTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAATTTCATCCATGAAGGTTTTTCCATGTGATCATTCTCTTAAAAATACCCCTGCTGAACAGAAGAAGACAGAGATGGAATTTTCGAGGCTACTAAATGTTGCTGAGAAAACCTCTGGTCTGTTCTTCTCATATGAAACTAATTTAACCCTGAGTGCACAGCGATTGAATGACCTGGGTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTTCTATGGAACAATTATATGTTAGAAGTGCTTATAGATAACAAGCTTGACCCATACTTACTCCCTGTAGTCCAAGGCAGCTTTCATTACTTTCAAGCAGCCATTGGGAAAGATGTTATTGACATCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTAGGATGTGGAGAAGAGGAGCTGATCCTGATGGGTATGTAGCTAATTTCGTGGAAACAGAACAAATTATGCACTTCAATGGGTATACTGCTTCATTTGTTCAGGTTCGTGGTTCAATTCCACTGCTCTGGCAGCAAATTGTTGACTTGACATACAAACCAAAATTTGAGTTATTGAGACTAGAGGAAGCCCCACGAGTCCTTGAGAGGCATTTCTTAGACTTAAGAAAAAAATATGGAGCAGTGTTGGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGGCTGTGTGAAAAATTTGGCAATACAATGCCGCATGTGGCCAGTGATGATGTAAGATATCTGCACTTTGACTTTCATCATATCTGTGGACACATTCATTTTGATCGTCTCTCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGAGAAATGGGTATCTTCTTTTGAATGAAAAGGGTGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTCTTGACCGTACAAATGTAACTCAGAGCATGATTGGCCGAAATATGTTGGAATACCAGCTTAGAAGGCTTGGCGTCTTTGGTGCTGAAGAAACAATTAGTTCACATCCAAATCTTGATGAAAGATTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTACTCAATATTCAGGAACTCCTGCTCTAAAAGGAGACTTTGTCAGATTTGGGCACCGCACAATTCAAGGGATACTTAATGATGGTTGGAATGCTCTTCAAAGATATTATTTGAATAATTTTTGTGATGGAACAAAGCAGGACGCAATTGATCTCCTGCAAGGACATTATATAGTTTCTGTCAGCCGAGATAACGCTGCCTCTTCTCAGAAAGGAGGCGTTGAAGCTATAGCTTCATTTCCTGTGGCTTTGGCTCTGGTTCTGACTGGATTTCTATTTGCAACCATGTCACTGAGGCAAGTTCGATATGATTTTCGGCACTTATTCTTTTCGCTAATGTGGGCAAGCATTAGTGTCGGTATAGCAGCATTTGTGAGGGCCAATGGCCGGGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGGGTTAA 1791 0.4143 MMEKADSVQKLYTRMRLWEFPDQYVIEPTDGSSGSCLAVSRVDGSMKLIDEVPECSSVRVPKIFTIFGVVGMLRLLAGSYLLVITERECVGSYLGHPIFKISSMKVFPCDHSLKNTPAEQKKTEMEFSRLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLDPYLLPVVQGSFHYFQAAIGKDVIDITLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIMHFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLRLEEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGNTMPHVASDDVRYLHFDFHHICGHIHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDERFKILWANHGDDISTQYSGTPALKGDFVRFGHRTIQGILNDGWNALQRYYLNNFCDGTKQDAIDLLQGHYIVSVSRDNAASSQKGGVEAIASFPVALALVLTGFLFATMSLRQVRYDFRHLFFSLMWASISVGIAAFVRANGRVFCNRPRLHNPRG* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01457 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Rops1g01457 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Rops1g01457 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01457 Rops-Chr1 32077272 32090213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01457 2 596 Acyl Lipid Metabolism Gene Families AT3G51460 76.717 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01457 K21797 - gmx:100796999 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01457 1 32077272 32090213 Rops1g01457 1 32077272 32090213 ECH