Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01449 ATGTTCGTCAAGAAACTCGTAGAGAAAGCTTCCATAAAGAAGCCTGGTGGAAATTCATCAGATGGGTTAAAAGCTAGTGATGTGGATCCACGCCTTGTATTTCATCATGGGGTACCATCAAGTGGTGCCAAGTTTGCCTATGACAATATTCAGAAGATACTAGCTCTTTCTACCAAGGATGGGAGGATTAAACTATTTGGAAAACATAATGCCCAAGTCCTACTTGAATCTACTGAGCCACTGCCTAGCAAGTTTTTACAGTTCATTCAGAACCAAGGGATCCTTATAAATGTCACTTCCAATAACCGTATTGAGGTTTGGGACATAGACAAGAAACTTTTGTCTGACATGTACATTGTTAAAGAAGAAATCACCTCTTTCGCAGTCATTCAACACAGTCTCTATATGTATGTTGGAGTTTCTAATGGTGATATTTCAGTTTTGAAGCTTGATCAAGAGCCATGGCATGTGGTAAGGATGAAGTATACCATACCTTTCTCAGCTTCTTATGGGAATTCAACTGAAGTGTCTCAAGACACTGCTGTGACACACATACTGCCTCAACCAGCAGCTGAAAGTAAGAGAGTTCTCATAATCTTTAAAAATGGCCAAATAATATTATGGGATATTCGAGAAAGCAGATCCATTTTCAAAACTGGTGGAAATGTGTCACAGCCACTGTATAATGAAACAAAGAAAGTGTCTTCTGCATGTTGGGTGTGTCCTTTTGGAAGTAAGTTGGTTGTAGGGTACAACAATGGAGAGCTCTTCATATGGAGCATCCCTTCTCTAAACAAAGGAAGTAGTTCAGCATCTGATTATAGAAGTCAAAACACTCCTACATTTAAACTTAACTTAGGATATAAATCAGACAAAACTTCCATAGGATCAGTAAAATGGACTTATGCTGAAGGAAAGGCTAGTCGATTATATGTCATGGGAGCTTCTGATTATGCCCCTTCAAACTCATTGCAGGTAGTGTTGTTGAATGAGCATACTGAATCTCGCACAATTAAGTTGGGACTTCATTTGTCTGAATGTTGTATTGACATGGAGATCATATCAACCTCAAGTGAGCAAAGCAAGAATAAACAAAATTCTTTGCTATTGCTTGGGAAATCTGGCCAAGTATATCTGTATGATGATAGTTTGATTGAAAGGTATCTATTACAATGCCAGTCTAAGTCCACTCCCTCAATGCCAAAGGAAGTGATTGTGAAGTTACCACTGGCAGATGCAACCATCACTACAGCAAAATTCATCTCCAACAATCCAAATGTGTTTAATTCTGAAGATGAGTATTACAGTCAGATGGTAAAAAATTATCAACCGCTTATTCCCCTTGAAACAAATCACAAAGATGGGTTTAGCCTGAGTTCTGCCAACTTCACTGGATTTTCAAAAGTTAAAAATTTGTACATTACTGGACACAGTAATGGAGCTATAACTTTTTGGGATGCGTCATGTCCCTTTTTCATCCCAATTTTGCAATTGAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGTATACCCTTGACGGAAGTATATTTCGATAGCAGCTCCCCTCTCCTTGTTTCTGGTGATCAGAGTGGAATGGTTCGTATATTTAGATTCCAACCCGAATCATATGCCTCCAGCAGCTTCATGGCTCTTACTGGAGGTACAAAGAAAGGGTCTGATCATGTAATCCGCAGTATGAAACTTGTAAAGACTACTGGTGCTGTAATTTGTATGAACATAGATCACAGCTCAAGGCTTCTTGCTGTTGGTTCTGATCAAGGAAACGTTTCAGTCATTAACATAGAGGACCCATCTCTGTTATATCAGAAACATATTGCAAGTGAAATTTCTACTGGTATCATCTCTCTGCAGTTCATAACCTGCAGTTTACATGGTTTCGAGAAAAACATTTTAGCTGTTGGAACAAAGGACTCATCAGTTCTTGCACTGGATAATGAAACTGGAAACATGCTGGGCACTGGAACTGTTCATCCTAAGAAGCCCTCTAAAGCTCTATTTATGCAGGTGTTAGATGGACAAGGCAAACCAATCACAGGATCAGTAACAAAAGATGGCTTAGACTTCAGAGAAGGAAATCGTATTGAGGATGCAACGATAAAACAATTTTACATTTTGCTGTGTTCTGAGAAGGCTTTGTATGTCTATTCTTTTGAGCATGCTCTCCAAGGAATCAAAAAGGTACTTTACAAAAAGAAGTTTCATTCCTCTTCCTGTTGCTGGGCATCGACATTTTACAGCCCCTCTGATATTGGTCTTATACTTCTTTTCACCAGTGGAAAAATAGAATTAAGGTCTTTGCCAGAGTTATCTCTTATAGTGGAGACTTCAATTAGAGGCTTCACTTATTCACCTCCAAAATTAAAGTTATTTTCTGACATCCAAATATGTTGTTCAAGCAAAGGAGATCTTGTTTTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCACTGTTGGTCCAGAGGAATATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTATAGGAAGGAAAGAATGCTATCACAAAAAGAGCTTGTTCCTGGCCCAGTCATTCATAAGGAAAAGAAAAAGGGCATATTCAGCTCTGCCATCAAAGATCTTACTAGCAGTAAAGAAAAGCATATGCCCGTCGTGGAAAAAAAAGATCCTAAAGAAAGTATCCAGGAACTCTCAGCAATGTTTTCATATGCAAATTTTCCATTGGATGCTAACAATAATGATAACCATACTGTGGATGAAAATCAGCTTGAATTAAACTTAGATGACATTGACCTGAAGGATCATGGACAAAAACGCAAAGAACAAAGCATATTAGGAGCTCTCAATAAGAAGATCTTGGCTGGCAAATTTCAGGCTCTGAAAGGAAGATCGAAAGAGAAGAAGGGCAACAACCAGAAAGCATCAGATAAGGAAGAGCAACAAAATGAGAAAGCTGACGCACTAGATCAAATTAAGAAGAAATATGGGTTTTCTTCTTCCTCAAGTGAAACAGGCGTTGCTAAATTGGCAGAAAGCAAGCTGCAAGAAAACATGAGGAAATTGCAGGGTATTAAGCTACATACTACGGAGATGCAAGATACAGCAAGATCATTTTCATCATTGGCAAAACAAGTGCTGCGAACTGCTGAGCATGATAGACGAAGTTGA 3171 0.3866 MFVKKLVEKASIKKPGGNSSDGLKASDVDPRLVFHHGVPSSGAKFAYDNIQKILALSTKDGRIKLFGKHNAQVLLESTEPLPSKFLQFIQNQGILINVTSNNRIEVWDIDKKLLSDMYIVKEEITSFAVIQHSLYMYVGVSNGDISVLKLDQEPWHVVRMKYTIPFSASYGNSTEVSQDTAVTHILPQPAAESKRVLIIFKNGQIILWDIRESRSIFKTGGNVSQPLYNETKKVSSACWVCPFGSKLVVGYNNGELFIWSIPSLNKGSSSASDYRSQNTPTFKLNLGYKSDKTSIGSVKWTYAEGKASRLYVMGASDYAPSNSLQVVLLNEHTESRTIKLGLHLSECCIDMEIISTSSEQSKNKQNSLLLLGKSGQVYLYDDSLIERYLLQCQSKSTPSMPKEVIVKLPLADATITTAKFISNNPNVFNSEDEYYSQMVKNYQPLIPLETNHKDGFSLSSANFTGFSKVKNLYITGHSNGAITFWDASCPFFIPILQLKQQSENDFSLSGIPLTEVYFDSSSPLLVSGDQSGMVRIFRFQPESYASSSFMALTGGTKKGSDHVIRSMKLVKTTGAVICMNIDHSSRLLAVGSDQGNVSVINIEDPSLLYQKHIASEISTGIISLQFITCSLHGFEKNILAVGTKDSSVLALDNETGNMLGTGTVHPKKPSKALFMQVLDGQGKPITGSVTKDGLDFREGNRIEDATIKQFYILLCSEKALYVYSFEHALQGIKKVLYKKKFHSSSCCWASTFYSPSDIGLILLFTSGKIELRSLPELSLIVETSIRGFTYSPPKLKLFSDIQICCSSKGDLVLVNGDQEIFVVSLLVQRNIFRLLDSVSCIYRKERMLSQKELVPGPVIHKEKKKGIFSSAIKDLTSSKEKHMPVVEKKDPKESIQELSAMFSYANFPLDANNNDNHTVDENQLELNLDDIDLKDHGQKRKEQSILGALNKKILAGKFQALKGRSKEKKGNNQKASDKEEQQNEKADALDQIKKKYGFSSSSSETGVAKLAESKLQENMRKLQGIKLHTTEMQDTARSFSSLAKQVLRTAEHDRRS* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01449 1056 Gene3D - 24 183 IPR015943 GO:0005515
Rops1g01449 1056 MobiDBLite consensus disorder prediction 960 992 - -
Rops1g01449 1056 Gene3D - 551 693 IPR015943 GO:0005515
Rops1g01449 1056 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 5 1049 - -
Rops1g01449 1056 Gene3D - 184 542 IPR015943 GO:0005515
Rops1g01449 1056 MobiDBLite consensus disorder prediction 961 992 - -
Rops1g01449 1056 FunFam Syntaxin-binding protein 5 isoform A 185 437 - -
Rops1g01449 1056 FunFam Syntaxin-binding protein 5 isoform A 23 182 - -
Rops1g01449 1056 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 47 668 IPR011047 -
Rops1g01449 1056 CDD R-SNARE_STXBP5_6 991 1048 - -
Rops1g01449 1056 SMART WD40_4 441 486 IPR001680 GO:0005515
Rops1g01449 1056 SMART WD40_4 27 67 IPR001680 GO:0005515
Rops1g01449 1056 SMART WD40_4 560 601 IPR001680 GO:0005515
Rops1g01449 1056 SMART WD40_4 220 260 IPR001680 GO:0005515
Rops1g01449 1056 SMART WD40_4 499 538 IPR001680 GO:0005515
Rops1g01449 1056 Coils Coil 971 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01449 Rops-Chr1 31993564 32004039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01449 - - gmx:100782049 1709.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01449 1 31993564 32004039 Rops1g01449 1 31993564 32004039 ECH