Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01428 ATGCTGCAACCCCAAAACCCAAAGTCAAAGAGAAGGGGAGCCGTTTTAGTGAGAAATTGTGGGGCACGATCACACCTTTACAGGGAAAAGATGAGCATGTCTGTTACCCTTAAAAAAGATAGGAAACCTATTTGCTCCGTAAAGTGCCTAGACTCACCTACTGAACTGCCACAAGAATTGAGCATAAATTCTATGGTTACAAAGGAGAAGATATCTAGTCTTTCTGGGTTGCCCCGGTTTTCATTAATCCCTGCCCCAGACTGTTCACGTGACAAGAATGAGTGGGGGAGGTTTTTGAATTTCCTATGCAAAAATGATATGGTTGCTTTTATAACCTTTGAGCAGTACAAGTTTTACATTCTGCCTCCGGCTAAAGCCTCTACATCTAGCCCTGTCAGTGTTGCATATCAGATAGACAACATATTTACTGTAGATACTTGTCCAAGGGATTGTGAATCAGGTTCACACTTAGCTGAGGAATGTGGTGGACCTGATACTTTCACGGTGAGAGGTCCAGCAAATGGTGCAGATGTTTCCTCGTCCAAGTTTCCTCCAGCTGAAGATCATGCTTGTCATTTTACAGCTGAAACTTGTGGCGGATTTCAATCTCATGTGAAGCAGGACAGACTCCCTGAGAAAAATTTTGTAAGAGCAGACCCAAGTTACCTGAAAACTCTTGGTCAGATTCACTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCAAGGGATGCCAAAGCAACTAAGATGGACATTTTTGTAGATATGATAAAGTTGAAGAAATCTAGGAAGGATGTTCCCATGCTGTCAGTTATTGATGATGGTCAAGGGATGAACCATAATGAGGTTGTTAAAATGGTATCTTTTGGGCACAAACAATCTGATGAAGATGACAAGGATCGCATTGGCAGATTTGGTGTTGGATTCAAGACAGGAACAATGAGGCTTGGGAGAGATGTTCTTGTTCTTACCCAAACTGCTAAGTCCAGATCTCTGGCTTTTCTTTCACAATCATTGAATGAAGGCAAAGATAATATTGAGATTCCCATAGTTAGTTACTGCCGACAAGGACAATTGATGGAAGTTGACACCAGTGTTCAAAGTGAAGCTTTGGCAAAATACAACTTGAAAGCTATTAAGGATTTTTCACCATTTAATAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTTGTAGCGGTACAGGAACACAGATATATATATGGAACTTGGATGAATGGGGATCAAATTGTTGTCTAGAATGGCATGATGGATTGAAAGGTGGGAGTTCTTTCCACCAAGGTGACATTTTCATCCGCAGCAGAAGGAGTCGTTCTCGTCTAGGACAAATTAATCAGAAGGTTCCATTGGATTACTCACTCCGAGCTTATTTGGAAGTCATCTTCTTAATTCCACGAATGAAGATACATGTTCAAGGGACACTGGTTAAAAGTCGACCAATAGCCAATTTCCTGACTAAAACTGTTGTTGAAACTGGTGAGATCTTGGGAAGGCCAATTGAATTGATTTTGGGATTCAGTCAATTAGAATGGGAGCAAGCAAGCTGTGGAATATTTTTGTATTGGCATGGTCGCTTAATTGAGGCATACAAGAGAGTTGGTGGCATGATTCATAGTGCAGATGTGGGTCGGGGTGTTATTGGTGTGATAGATGTGACCAATATTATGGATGATCGGGATGGTCGTGTGTGGGTGCATAACAACAAGCAAGGATTCCAAGACTCTGAATCATTTGTATGTCTTGAGCAGTGGCTTGGCAGAAAAGTAGATGAATATTGGGACAATAATTTTGATTCACTCAAGTTGGCCAAAGATAATTATGTCTACAAACCAGATTGTGAATGGGTGCAATGTGACAAGTGCAGAAAGTGGAGAATATTACCTCCTAACTTTGATAGTAGAAAATTACCCACGCAATGGTTCTGTTATATGGAGCCTTTCAAAGGTCAATGTGCAGATGAGGAACAGAAGATAAAGCCTGGCATAGTCATAGTTTCAACAAAGCGGTCAGGATATGATTGCAAGCTGAAAGATCCTCATAGCAAAGATGACAAATTGGTCAATTTTGGGGATGTTGAATCGCCAGGTTTAAAGCGGTTGAGAAAGGGACTTCCAAAATGTGAGGATGTCAGATCTCCATCCCTGATCAAGCGGAGAAAGGGACCTTAA 2196 0.4112 MLQPQNPKSKRRGAVLVRNCGARSHLYREKMSMSVTLKKDRKPICSVKCLDSPTELPQELSINSMVTKEKISSLSGLPRFSLIPAPDCSRDKNEWGRFLNFLCKNDMVAFITFEQYKFYILPPAKASTSSPVSVAYQIDNIFTVDTCPRDCESGSHLAEECGGPDTFTVRGPANGADVSSSKFPPAEDHACHFTAETCGGFQSHVKQDRLPEKNFVRADPSYLKTLGQIHSGWIFGGIAELVDNSRDAKATKMDIFVDMIKLKKSRKDVPMLSVIDDGQGMNHNEVVKMVSFGHKQSDEDDKDRIGRFGVGFKTGTMRLGRDVLVLTQTAKSRSLAFLSQSLNEGKDNIEIPIVSYCRQGQLMEVDTSVQSEALAKYNLKAIKDFSPFNKYLIGEKAALFCSGTGTQIYIWNLDEWGSNCCLEWHDGLKGGSSFHQGDIFIRSRRSRSRLGQINQKVPLDYSLRAYLEVIFLIPRMKIHVQGTLVKSRPIANFLTKTVVETGEILGRPIELILGFSQLEWEQASCGIFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVIDVTNIMDDRDGRVWVHNNKQGFQDSESFVCLEQWLGRKVDEYWDNNFDSLKLAKDNYVYKPDCEWVQCDKCRKWRILPPNFDSRKLPTQWFCYMEPFKGQCADEEQKIKPGIVIVSTKRSGYDCKLKDPHSKDDKLVNFGDVESPGLKRLRKGLPKCEDVRSPSLIKRRKGP* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01428 731 Gene3D - 612 668 - -
Rops1g01428 731 Gene3D - 213 386 IPR036890 -
Rops1g01428 731 ProSiteProfiles Zinc finger CW-type profile. 618 668 IPR011124 GO:0008270
Rops1g01428 731 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 198 675 IPR045261 GO:0016887
Rops1g01428 731 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 229 394 IPR036890 -
Rops1g01428 731 Pfam CW-type Zinc Finger 623 665 IPR011124 GO:0008270
Rops1g01428 731 Pfam Morc6 ribosomal protein S5 domain 2-like 461 602 IPR041006 -
Rops1g01428 731 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 355 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01428 - - gmx:100782161 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01428 1 31647493 31672741 Rops1g01428 1 31647493 31672741 ECH