Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01425 ATGAGATTTAGTTTTTGCCCTAATAACAATTTGAGCAAGCTCTTGAACAAAGCGCGCAACTTGATCGGTGCCGGACGCGCTTCTTCCACCAATTCCTCCGCCGCCATGGGTGACATCCAGGTCCTCAAAACGAAGCTCTGCATCATTGGAAGCGGTCCCGCAGCTCACACCGCCGCCGTCTACGCCGCTCGCGCCGAGCTCAAACCCATCCTCTTCGAAGGTTGGATGGCCAACGACATCGCCCCCGGCGGCCAACTCACCACCACCACCGACGTCGAAAACTTCCCCGGTTTCCCCGACGGCATCCTCGGCGGCGAACTCATGGAACGTTGCCGCAACCAGTCCCTCCGATTCGGCACCGAGATCTTCACCGAGACCGTTTCCAAGGTCGATTTCTCAACCCGTCCTTTTAGGGTTTTCGCTGATTCCAAATCCGTGGAGGCCGATTCCGTCATCGTCGCCACCGGAGCTGTCGCTAAACGGTTACCGTTCACTGGCTCCGGCGACGGCCCCGACGGATACTGGAACCGCGGGATCTCAGCGTGTGCCGTGTGCGACGGTGCTGCTCCGATTTTCAGGAACAAGCCGCTTGCCGTGATCGGCGGTGGTGACTCGGCTATGGAGGAAGCCACGTTCCTCACAAAGTACGGTTCCGTAGTGTACATAATTCACCGTAGGGACACGTTCAGGGCTTCAAAGATTATGCAGAACAAGGCGTTGAGCAATAGCAAGATCAAAGTGATATGGAACTCGGTGGTGCTTGAGGCATATGGGGATGGAGACAAGAAGAGGGTTCTTGGAGGGTTGAAGTTGAAGAATGTGGTGACACAAGAGGTGTCTGAATTGAAGGTTTCTGGATTGTTCTTTGCAATTGGGCATGAGCCTGCAACTAAGTTCTTGGGGGGTCAGCTTGAACTTGATTCTGATGGCTACATTGTGACCAAACCAGGAACCACAAAGACTAGTGTTGAGGGAGTTTTTGCTGCTGGCGATGTTCAGGACAAGAAGTATAGGCAAGCTATTACTGCTGCTGGCACTGGGTGCATGGCAGCTTTGGATGCAGAACATTACCTGCAAGGGATTGGTTCACAACAGGATAAGAGTGATTGA 1110 0.5378 MRFSFCPNNNLSKLLNKARNLIGAGRASSTNSSAAMGDIQVLKTKLCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMERCRNQSLRFGTEIFTETVSKVDFSTRPFRVFADSKSVEADSVIVATGAVAKRLPFTGSGDGPDGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSVVYIIHRRDTFRASKIMQNKALSNSKIKVIWNSVVLEAYGDGDKKRVLGGLKLKNVVTQEVSELKVSGLFFAIGHEPATKFLGGQLELDSDGYIVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQGIGSQQDKSD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01425 369 Gene3D - 48 357 IPR036188 -
Rops1g01425 369 NCBIfam thioredoxin-disulfide reductase 45 358 IPR005982 GO:0004791|GO:0005737|GO:0019430
Rops1g01425 369 FunFam Thioredoxin reductase 168 296 - -
Rops1g01425 369 Gene3D - 164 296 IPR036188 -
Rops1g01425 369 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 182 204 IPR008255 GO:0016491
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 149 157 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 321 339 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 104 114 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 192 216 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 175 187 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 83 98 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 286 307 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 45 67 - -
Rops1g01425 369 PRINTS Pyridine nucleotide disulphide reductase class-II signature 244 260 - -
Rops1g01425 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 311 333 - -
Rops1g01425 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 284 300 - -
Rops1g01425 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 196 214 - -
Rops1g01425 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 148 166 - -
Rops1g01425 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 46 65 - -
Rops1g01425 369 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 44 359 - -
Rops1g01425 369 SUPERFAMILY FAD/NAD(P)-binding domain 43 358 IPR036188 -
Rops1g01425 369 Pfam Pyridine nucleotide-disulphide oxidoreductase 45 346 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01425 Rops-Chr1 31522616 31529617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01425 K00384 - gmx:100786086 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01425 1 31522616 31529617 Rops1g01425 1 31522616 31529617 ECH
Rops1g01425 1 31522616 31529617 Rops2g03136 2 57090121 57093205 PCT