Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01421 ATGGCGGCGACGGAGAAAGTGTTCAACGGGAGAGAAGAGTTCAGCGATTCGTCAAACTTGTTCGGCACGATGTTAGCAATGTCACTGTGGCTAGGAGCTATTCACTTCAACGTCGTTTTGATCCTCTTCGCCGTGTTCTTCTTTCCTCTCTCGAGATCGCTCTTGGTTTTCGGTTTTCTGTTTATTTTTATGGTGCTACCTGTGAACGCGAAGAGCAAACTTGGCCGAAAATTGTCCAGGTACATATGCAAGCACGCTTGCAGTTACTTTCCAATCACGCTACATGTAGAGGATATAAAAGCCTTTGATCCTAATCGTGCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGCGTTGTTGCCCTAGCTGACAATACAGGTTTCATGCCTCTTCCAAAAATTAAAGTTCTTGCTAGCAGTGCGGTGTTCTACACACCATTTTTGAGACACATATGGACATGGTTGGGTCTTGCACCAGCAACAAAGAAAAATTTTACCTCCCTGTTAACAGCTGGCTATAGTTGCATTTTAATACCTGGTGGAGTGCAAGAAGCATTTCTCATGCAGCATGGCTCTGAGATTGCTTTCCTTAAGGCAAGAAGAGGTTTTATCCGCATAGCGATGGAGAAGGGCCGACCCTTGGTTCCAGTTTTCTGCTTTGGTCAGTCAAATATCTATAAGTGGTGGAAACCAGGTGGGAAGTTCTTTCTGAAATTTGCGAGGGCTATCAAGTTTACCCCAATATGCTTTTGGGGAATTCTCGGATCCCCATTACCGTTCAGACGTCCAATGCATGTAGTGGTGGGTAGACCAATTGAGCTAGACAAAAATCCAGAACCAAGCGCGGAGGAGGTTGCCAAGATACACAGTCAGTTTGTAGAAGCACTTCAAGATCTCTTCGAAAGGCACAAAGCTCGGGCTGGCTATCCAAACCTTGAGTTAAGAATTGTTTGA 963 0.4465 MAATEKVFNGREEFSDSSNLFGTMLAMSLWLGAIHFNVVLILFAVFFFPLSRSLLVFGFLFIFMVLPVNAKSKLGRKLSRYICKHACSYFPITLHVEDIKAFDPNRAYVFGYEPHSVLPIGVVALADNTGFMPLPKIKVLASSAVFYTPFLRHIWTWLGLAPATKKNFTSLLTAGYSCILIPGGVQEAFLMQHGSEIAFLKARRGFIRIAMEKGRPLVPVFCFGQSNIYKWWKPGGKFFLKFARAIKFTPICFWGILGSPLPFRRPMHVVVGRPIELDKNPEPSAEEVAKIHSQFVEALQDLFERHKARAGYPNLELRIV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01421 320 Pfam Diacylglycerol acyltransferase 45 313 IPR007130 GO:0008374
Rops1g01421 320 CDD LPLAT_MGAT-like 103 308 - -
Rops1g01421 320 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 25 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01421 Rops-Chr1 31450752 31455786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01421 9 320 Acyl Lipid Metabolism Gene Families AT3G51520 67.197 9.22e-165 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01421 K22848 - gmx:100784657 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01421 1 31450752 31455786 Rops1g01421 1 31450752 31455786 ECH