Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01409 ATGGTTCTAAAACCCATCATAATAACAACACCACCCACACCTTCTTCATCTCCACACCTCCCTCTTCTTAACATACCATCTGTAAGAACCCAAGAAAAGCCCCCAACCACCACCACCCAAAAAACCAAAGCAGACCCAGTGATCAAGAAGCCTGTGAATGTAAAACGAACAAGAGAACCTTCAGTGCCAGCACTGATCTTCAACACATTCGACGACATCATCAACAACTTCATAGACCCTCCATTGAAACCCTCAGTAGACCCAAGACACGTCTTGTCTCAAAACTTTGCACCAGTGGAGGAGCTACCTCCAACGGAGTGTCAAGTCATAGAAGGCTTACTCCCACCATGTCTCGACGGTGCTTACATCAGAAATGGCCCAAACCCACAGTTCCTCCCTCGTGGACCCTACCGCATCTTCGACGGCGACGACATGCTTCACGCCATCCGAATCAAAAACAACAAATCCACCCTCTGCAGTCATTACGTCAAAACCTACAAATACAAAACCGAAAACGACGACGGTTAG 528 0.4754 MVLKPIIITTPPTPSSSPHLPLLNIPSVRTQEKPPTTTTQKTKADPVIKKPVNVKRTREPSVPALIFNTFDDIINNFIDPPLKPSVDPRHVLSQNFAPVEELPPTECQVIEGLLPPCLDGAYIRNGPNPQFLPRGPYRIFDGDDMLHAIRIKNNKSTLCSHYVKTYKYKTENDDG* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01409 175 MobiDBLite consensus disorder prediction 1 21 - -
Rops1g01409 175 PANTHER BETA-CAROTENE DIOXYGENASE 99 174 IPR004294 GO:0016702
Rops1g01409 175 Pfam Retinal pigment epithelial membrane protein 98 173 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01409 Rops-Chr1 31284023 31284550 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01409 K09840 - tcc:18606899 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01409 1 31284023 31284550 Rops1g01409 1 31284023 31284550 ECH