Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01401 ATGGAGGGGGAAGAAGGAGGGGGCATAAGGCTAAGCAAGAGATTCTCCAACGACAAGGTTTCAGGAGAAGTTGACTACAAAACCAAATCAGGAACCGCATGGAGCCATTCTTACCTCAACCAGAAACCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCTCCGAACAAACCCACGCGCAGCGTCAGCGACGCGCCGATGATGTCGCTCGTGAGTATGCTCAGGAACAAGAGTTTTATCGCCAAACCGCTCTCATATCCAAGAAGGAAAAGGAAAAGGTGGAGCTGATGCAAGCTGTTAGCTTTATGTATGTTCGTCCTCCTGGTTACAATGCAGAAAGTGCCAAGGCTGCGGAGATGAATGATCAGAAGAAAACAGAGGACATGATGGATAAGGAAGAGACTCCACACACTAATGCTGATGGACCTTCCTCTTCATTGCCACCGAATTCCTCGCATTTGAGTGAACAGAAGAAAAAACCGAGGCCGAAAGATGTTTTTGGGCGTCCTCTACCAACTGAAGAAGAATTTGAGATTCTTAAAAATGCGCCAAGGCTGGAAACAGGAGTTCCTGCCAGGGTGAAACCTTTTGGAGTTGAAGTCCGTAATGTAAAATGTTTAAGATGTGGTAACTATGGTCACCAAAGTGGTGATCGTGAATGCCCCTTGAAGGATGCTATAATGCCAAATGAAGAGAGCAGATTGAAAAGAGATGACCCCTTGAATGCTATCCTTGCCCACACAGATCATAGTGAGCCTCTAAAATGGGAGCTCAAGCAAAAGCCAGGAATCAGTCCTCCTCGTGGAGGGTTTAAACCAGATGACCCCAACCAGCAGATAGTTGCCGATGACATATTTGATGAGTATGGAGGTTTTCTCAGTATGGATAATATCCCTGATTTATTGACTAACTTTTCTAAGAAACCAAAAAAGTCCAAAAAGAGCAAGCACAAAAGGCAGAAACTAGTACATTCAGAAAGTGAAGCATCTTCTGATGATGGAGAGAGAAGGTCTAAGAAAAAAAAGGTTAAGGGACACAAAAAGAAGCGAGATCACTCAAAGTCAAGTTCATCAGACATTTCAGTCTCAGCAAAAGGTCATGGAAAAAGCAGACGCAAGAGTTCCAATTCATCAGAAGATTCTGACAGTGACAGGAATGATCAAAGTAGAAGGGCTAAACGAGAGCATTCCTTTTCACCCAAAGGCTCTGATCATCTTAGGCATGGTCGGAGTAAGCATGGCAGACGAAGGCATTCGTTTTCATCTGAGGGGTCTGATAGTGGCCAGGATGACAGCAGTAGAAGGAATATACAAAGGCATAAGAGGAAGCATGGTAGAAAAAGACATTCTTATTCGGATGAGGATTCTGGTCATGCTGTTTATCAAGCATATCATAAGAGCAGAGATGAGCATTCTCATTCATCGGATGATTCTAATCATCGAAGACAATCCAAGGTTAAAAGGAGCAGCCATAAGCACTCATCAACAGCCCATTGCGGTTCTCAAAAGCATAACAGAATTTATAGTCCTGATCGCTACCATGGAAGTCAGAAGAGCAGAGCTGAGCATTCTTATTCATCTGAAGATTCTGATGTTGACAAGGATGATCGAAGTAGAAGGATCAAGCAAAAGCATAAGGCTTCTGAACATCCTGAGCACGATATGAGTAAGAACAGAAAAAAACATTGTTATTCATCTAAGGATTCTGGTGACCGTGGATATCATAGAAATGAAAAGAGCAGATATGAGCGTTCTTATTCGTCTGATAATTCTGATCATCGTGAAAAACATCATAAGTTGAGAAGGAGCAGCCACAAACATTGA 1833 0.4337 MEGEEGGGIRLSKRFSNDKVSGEVDYKTKSGTAWSHSYLNQKPWHPLSYPNQRRKWISEQTHAQRQRRADDVAREYAQEQEFYRQTALISKKEKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDQKKTEDMMDKEETPHTNADGPSSSLPPNSSHLSEQKKKPRPKDVFGRPLPTEEEFEILKNAPRLETGVPARVKPFGVEVRNVKCLRCGNYGHQSGDRECPLKDAIMPNEESRLKRDDPLNAILAHTDHSEPLKWELKQKPGISPPRGGFKPDDPNQQIVADDIFDEYGGFLSMDNIPDLLTNFSKKPKKSKKSKHKRQKLVHSESEASSDDGERRSKKKKVKGHKKKRDHSKSSSSDISVSAKGHGKSRRKSSNSSEDSDSDRNDQSRRAKREHSFSPKGSDHLRHGRSKHGRRRHSFSSEGSDSGQDDSSRRNIQRHKRKHGRKRHSYSDEDSGHAVYQAYHKSRDEHSHSSDDSNHRRQSKVKRSSHKHSSTAHCGSQKHNRIYSPDRYHGSQKSRAEHSYSSEDSDVDKDDRSRRIKQKHKASEHPEHDMSKNRKKHCYSSKDSGDRGYHRNEKSRYERSYSSDNSDHREKHHKLRRSSHKH* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01401 610 MobiDBLite consensus disorder prediction 259 283 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 1 22 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 158 174 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 508 599 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 375 408 - -
Rops1g01401 610 SMART Cir_N_3 43 79 IPR019339 -
Rops1g01401 610 MobiDBLite consensus disorder prediction 324 342 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 142 157 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 301 610 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 451 486 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 421 439 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 117 174 - -
Rops1g01401 610 PANTHER CBF1 INTERACTING COREPRESSOR CIR 8 453 IPR040014 GO:0003714
Rops1g01401 610 MobiDBLite consensus disorder prediction 121 141 - -
Rops1g01401 610 MobiDBLite consensus disorder prediction 487 502 - -
Rops1g01401 610 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 44 79 IPR019339 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01401 - K06066 gmx:100788280 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01401 1 31204999 31209864 Rops1g01401 1 31204999 31209864 ECH