Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01399 ATGACTTTTTCCGACGAAGAGGACGAAAATCTAGCTCAATTTCTGGAATCAGAAGTCCTCTCCGAGGTCTCTGACAAGGAAGAGGAAAATGTGGAGGAACCCAAAGCAAAGAGAAAACGCATAGAGGAGGCTGAGAGTACCGAGCAGGGTACCAAACAAACTTCTGGTTCTTCATCAGAGTCTAAGAACTATGGTGTCAATAATGGTGTGGTGTCCAGAAGGATTGAGACTGGTTTTTTCAGCAAAATCCCACCTGAGCTTTTCCACCACATCCTTAAATTTCTGTCCTCCGAGGACCTTGTTTCTTGTTCCTTAGTCTGTAGATTTCTAAATTATGCAGCATCGGATGAAGCATTGTGGCGTCGCTTGTACTGTATGCGATGGGGTCTTCTTCCCCCCACGAGGAAGTTAAGGGAATGCCCATGGAAAAAGTTATACATTCAGCGTGATGGAGAGGACATGGTTGAACTTGTCAGAAACTGCCAAAATGAGTTTAAGGAGTATTACATTCAAATGCAAGCAGCTAAGAGAAGTCAAGCACCTCATCCGTCACAGTTGAAGGATGACAGGATAATTCTCGACAAAACATTAGCTGATCAAGTGTCATCATGGAAAAGCAGCAGGGGCCTCAGTGAGACAGTGGTGACTGATCATGCTTGTTCTGGCGAAACATGCTCTTACTACCAAATTGGGGATGTATTTATCTGCGAGAAAACTGGTCAAGTTCATGTTTGTGATGAAACATGTAGAGAAGTAATTATGGATCCCGCAAACGAGCTTTTGGTCTGTACAATATCAGGACACTGTTTTGATAGATTACTATCACCTGCTGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGCGACAGATGAGGCAGAACCATTTATGGGATCTGGCCGTTTTGCTCGAGCTTATTTGCTTGGATACAATTGTGCTGATGAGAAGGAGCTTGAAGCTACTTTGAGGTTTTGTTGA 981 0.4404 MTFSDEEDENLAQFLESEVLSEVSDKEEENVEEPKAKRKRIEEAESTEQGTKQTSGSSSESKNYGVNNGVVSRRIETGFFSKIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAPHPSQLKDDRIILDKTLADQVSSWKSSRGLSETVVTDHACSGETCSYYQIGDVFICEKTGQVHVCDETCREVIMDPANELLVCTISGHCFDRLLSPAEMEPDAEQQQGGATDEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01399 326 CDD F-box_AtSKIP31-like 80 125 - -
Rops1g01399 326 Pfam UL92 family 224 287 IPR004289 -
Rops1g01399 326 ProSiteProfiles F-box domain profile. 77 123 IPR001810 GO:0005515
Rops1g01399 326 Gene3D - 66 154 - -
Rops1g01399 326 MobiDBLite consensus disorder prediction 20 65 - -
Rops1g01399 326 Pfam F-box-like 81 125 IPR001810 GO:0005515
Rops1g01399 326 SMART fbox_2 83 123 IPR001810 GO:0005515
Rops1g01399 326 MobiDBLite consensus disorder prediction 48 65 - -
Rops1g01399 326 FunFam F-box family protein-like 67 154 - -
Rops1g01399 326 PANTHER F-BOX ONLY PROTEIN 3 4 324 - -
Rops1g01399 326 SUPERFAMILY F-box domain 69 149 IPR036047 GO:0005515
Rops1g01399 326 MobiDBLite consensus disorder prediction 28 47 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01399 - - gmx:100778591 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01399 1 31180447 31183555 Rops1g01399 1 31180447 31183555 ECH