Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01391 ATGGAGAACAATGGGGGAAGCCATATGAGAAATGGTAGCTCTAGAAAGGGTAGCTTTAGGTTGGGTTTGGGAGTGAATGGAGCAAAAGATCACACAGTGATTGAGCTTGGTAGTATTGACACACAAAGACTTCTTCTAGCTGGTGGAGAGAGAGAGAAACAACAACCTCTCAAAAACTCTCTCTCTCCTAGGCAGATGAAATCCCTCACTGTTCTTTGTGACACTATCTTACCTTCTATCAATGACTTTGTTGGTGTCTCTGATGATTCTGTTGCCACCTTTTACCGAATTTCAGCTTCCATGGCTGGAACACCTGAACGTCTTGGGGGTGTGATAAGTGAGAGATTGAAGCACCCTATGACAGGGTTACTGAAATTGGTGTTATGGCTACTATCTACATGGTTTGGGACTTTCATTATCTGTGGCATGGCATGCCTCTCAACCAAGTTCCCTTTCATCCACAGCTATCCTGACCTGTCTCTGCAGAAACGCGAAGAGATAATGAAGTCATGGTCTCTTAGTTACATTCCTCACTTGAAGATGTTTTTCAGGACCATCAAACTTCTCACTCTCCTAGTCTTCTTCACTCAGATAGATGAATCAGAAGACAACTCTTCATGGAAGGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCTCAGTTAAAGAACCATTTTTTACAAGGAACATCTAAAGGGGCACAAGAGGCTAAGGAAGATGATGATGCTGAAGAGGTCATAGGACCCCTCTACAAAGGTCTGGTCCATCTGAATTACCCAAGAGACATCACTGTAGATGCTCTAAGAAGATTTGGATTCCCTGTCTCAGTCAATCGTAGGAAGCCAAAAGTTGCTGCTAAATTGTCATCTCCTTCTTTAGTTATCCAATGTGATGCAGTGGTAGTGGGTTCAGGCTCAGGAGGTGGTGTGGTAGCTGGAATTTTGGCAAAAGCTGGTTACAAAGTGCTGGTCTTGGAGAAAGGTGGCTATTCTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAACCATGGATCAAATGTACCTTTCTGGTGGTTTGGTTGCAACTGATGATATGAGTGTAGTCATATTATCCGGATCCACTGTTGGTGGAGGGTCTGCAATCAACTGGTCTGCATGCATTAAAACCCCTCAGCATGTGTGCAAGGAGTGGTGTGATGAACATGGGCTAGAATTGTTTGAAAGTGAAATGTATAAAGAAGCCATGGATGCTGTCTGTGATAAAATGGGAGTTCAATCTGAGATTGAGGATGAAGGATTCAATAATGCAGTCCTGAGAAGAGGGTGTGAAGAAATGGGATATCCTGTGAGTAATATTCCTCGGAATTCGCCACCAGATCATTACTGTGGCTGGTGTTGTATGGGGTGTAAGGATGGAAGGAAGAAGGGTACCTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGCAATGGAGCAATTCTTCCAGGTTGTGAGGCAATAAAAGTCTTGCATAAGAAAAAGCAAGGAAGTGATAGAAAGACTGCAAGAGGAGTGGCTTTTGAATTTGAAAACAAAGGAACTAAAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAACACTCAATACTCCATCATTACTTAAAAGAAGTGGCTTAAAGAATGAGAACATTGGGAAACACTTGCATCTCCATCCAGTGACAATGGCATGGGGCTACTTCCCAGATGCACCTGCACCTGAGGTGTGGCCAGAGGCACATAAAAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCTCCTGTTGTTGCAGAGTTTGAAAAATCTGGATATGGTGCAGTGATCCAAACACCTGCATTGCATCCTGGTATGTTCTCAATTGTCATGCCATGGGTTTCTGGAACCGATATAAAAGATCGGATGCGAAAGTTTTCTAGAACAGCTCATGTATTTGCACTGGCAAGGGATCAAGGATCAGGGACAGTGAATTCTCCAAGTCGAATCAGCTATCAGATGGAAGATGGAGATGAAGAGAATTTGAAAAAGGGACTTGATAAGGTATTGAGAATTCTGGCAGCAGCTGGAGCTGAAGAAATTGGAACTCATCATAACATGGGAAGGACCTTAAATGTAAAGCAGGTGAGCTATCATGAATTTGAAAAATTTGTTAAAGAGGAAAGTTCAAGGCCATTAACAGACCTTAGAACACCATTGTGCTCGGCACATCAGATGGGAAGCTGTCGGATGGGTTTTAATCCGAAGCAATCAGTAGTGAATCAGACAGGGGAGACATGGGAAATGGAGGACCTTTATGTGGCAGATGCAAGTGTCTTCCCCACAGCTTTGGGAGTGAATCCAATGATCACTGTTCAAGCTATTGCTTACTGCACAGCACAATCTGTTCTTCAGGTTCTTAGAAGGAAAAGAAGTAAATGA 2430 0.4329 MENNGGSHMRNGSSRKGSFRLGLGVNGAKDHTVIELGSIDTQRLLLAGGEREKQQPLKNSLSPRQMKSLTVLCDTILPSINDFVGVSDDSVATFYRISASMAGTPERLGGVISERLKHPMTGLLKLVLWLLSTWFGTFIICGMACLSTKFPFIHSYPDLSLQKREEIMKSWSLSYIPHLKMFFRTIKLLTLLVFFTQIDESEDNSSWKAIGYCGPDPEFKAQLKNHFLQGTSKGAQEAKEDDDAEEVIGPLYKGLVHLNYPRDITVDALRRFGFPVSVNRRKPKVAAKLSSPSLVIQCDAVVVGSGSGGGVVAGILAKAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYLSGGLVATDDMSVVILSGSTVGGGSAINWSACIKTPQHVCKEWCDEHGLELFESEMYKEAMDAVCDKMGVQSEIEDEGFNNAVLRRGCEEMGYPVSNIPRNSPPDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAILPGCEAIKVLHKKKQGSDRKTARGVAFEFENKGTKDICVVESKVTIVACGTLNTPSLLKRSGLKNENIGKHLHLHPVTMAWGYFPDAPAPEVWPEAHKKSYEGGIMTAMSPVVAEFEKSGYGAVIQTPALHPGMFSIVMPWVSGTDIKDRMRKFSRTAHVFALARDQGSGTVNSPSRISYQMEDGDEENLKKGLDKVLRILAAAGAEEIGTHHNMGRTLNVKQVSYHEFEKFVKEESSRPLTDLRTPLCSAHQMGSCRMGFNPKQSVVNQTGETWEMEDLYVADASVFPTALGVNPMITVQAIAYCTAQSVLQVLRRKRSK* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01391 809 PIRSF Lg_Ch_AO 49 809 IPR012400 GO:0046577
Rops1g01391 809 SUPERFAMILY FAD/NAD(P)-binding domain 296 800 IPR036188 -
Rops1g01391 809 Gene3D - 284 604 IPR036188 -
Rops1g01391 809 Pfam GMC oxidoreductase 299 565 IPR000172 GO:0016614|GO:0050660
Rops1g01391 809 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 55 808 - -
Rops1g01391 809 Gene3D - 722 806 IPR036188 -
Rops1g01391 809 Pfam GMC oxidoreductase 665 794 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01391 Rops-Chr1 31038394 31047943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01391 29 803 Acyl Lipid Metabolism Gene Families AT4G19380 57.362 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01391 K17756 - gmx:100779139 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01391 1 31038394 31047943 Rops1g01391 1 31038394 31047943 ECH