Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01371 ATGCAAGAGGTGCAAACCTATAGACGAAATAAAAAAAAACAGATAAATATGCTCAAAGCTATAGCTGCGCTTCCTCTTACGCCCTCTTCTCTCACTAGAAGCGTGTTGAGGAAGATGAGCAGCACTCCCTCCTCACCAGCATATCCTAAGTTCGTTTCCGTAGAAGGTGCCGATATCCATTCCAGAACTAAACCCGATGGCTTCAGATTCAGCCTTGTCTCCTATAACATATTGGCTCAGGTTTATGTGAAGAGCTCTTTGTTCCCTCACTCTCCTTCCTCGTCTCTCAAGTGGAAACATCGTTCTAACTCTATTTTAGAAGTTCTCAAGAACTTGGGAGCTGATTTTTTCTGCCTACAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAACATGCAGGAGCTAGGATATTCTTCTGTTTACATGAAGAGAAGTGGACAGAAGCGTGATGGGTGTGGGCTATTTTACAAGCATGACCGTGCAGAATTGGTCTTAGAGGAAAAAATTGAATACAATGATCTTGTAAAGTCAATTCAAGATGCAAACTCTTCAAATGATGATGAACACAGCAATGTCCAGACTGTACAGCCAGAAAAACAAAAGGATGTTGCACCCAAAAATGGACCTAAATCAGGTACTGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGATTGTGTTGGAATTCTGGCTGCATTCAAATTCAAAGATCCCTCTCAACATGTTGTTATTGTGGCCAACACACATCTTTATTGGGATCCTGAATGGGCTGATGTCAAGCTCGCACAAGCTAAATATCTTCTATCTCGCTTAGCACAATTTAAAACACTGGTATCAGATAGATATGAATGCATGCCTGAAGTCCTAGTGGCTGGTGACTTCAATTCTACGCCAGGAGATATGGTTTATCAGTACCTCATATCAGGCAATCCTTCATCAGAACTGATGCCTGACTGTATAGAGGAGCTTCCTATCCCCTTATGTAGTGTCTATGCTTCTTCAAGAGGAGAGCCACCATTCACAAACTACACACCTGGCTTCACTGGAACACTCGATTATATATTATTTTCCCCCTCTGACCACATGAAACCGATTAGCTATCTTGAGCTTCCAGATTCGGAAGCAGCTGACATTGTTGGTGGACTGCCAAACTTAAGTCATCCAAGCGATCACCTACCAATTGGTGCTGAATTTGAAATCGTCAAGGAATAA 1227 0.4222 MQEVQTYRRNKKKQINMLKAIAALPLTPSSLTRSVLRKMSSTPSSPAYPKFVSVEGADIHSRTKPDGFRFSLVSYNILAQVYVKSSLFPHSPSSSLKWKHRSNSILEVLKNLGADFFCLQEVDEFDSFYKGNMQELGYSSVYMKRSGQKRDGCGLFYKHDRAELVLEEKIEYNDLVKSIQDANSSNDDEHSNVQTVQPEKQKDVAPKNGPKSGTEDRGDPNDPRVRLKRDCVGILAAFKFKDPSQHVVIVANTHLYWDPEWADVKLAQAKYLLSRLAQFKTLVSDRYECMPEVLVAGDFNSTPGDMVYQYLISGNPSSELMPDCIEELPIPLCSVYASSRGEPPFTNYTPGFTGTLDYILFSPSDHMKPISYLELPDSEAADIVGGLPNLSHPSDHLPIGAEFEIVKE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01371 408 MobiDBLite consensus disorder prediction 182 201 - -
Rops1g01371 408 Gene3D Endonuclease/exonuclease/phosphatase 38 408 IPR036691 -
Rops1g01371 408 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 35 405 - -
Rops1g01371 408 MobiDBLite consensus disorder prediction 204 225 - -
Rops1g01371 408 FunFam Carbon catabolite repressor protein 4 homolog 4 48 408 - -
Rops1g01371 408 Pfam Endonuclease/Exonuclease/phosphatase family 73 366 IPR005135 GO:0003824
Rops1g01371 408 SUPERFAMILY DNase I-like 69 405 IPR036691 -
Rops1g01371 408 MobiDBLite consensus disorder prediction 182 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01371 Rops-Chr1 30462961 30467448 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01371 K12603 - gmx:100775932 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01371 1 30462961 30467448 Rops1g01371 1 30462961 30467448 ECH