Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01365 ATGGATGCTATAAGGAAGCAAGCTAGCAAATTGAGGGAGCAAGTTGCCAGACAACAACAGGCTATACTTAGGCAGTTGGGGCAACTTAGCAATGAACCTCTCATGACTGATGAATCTGAACTTGAATGTCACCAGCAACTTCGAAAGTTATTCACTTCTACAAAAACAGCTAAGCATTTTCAGCGGCATATTGTTCGTGGTATTGAAGGATTCATCTCTGTTAGTACCAAGCAGATGGAGATAGTAAGGAAGTTGGCTAAGGATTGTTGTAAGTATGGGACTGAGAATCAAGGTAGTAGTTACCCACTTGCAACGGCTTCTCTTCAATTGGGTAACTCATACGATATATTGGAAAATGAGAGGGAGACTTTGCTTGGATTCTTAGGTGATCAGATATCTGAGCCACTGCGGGCACAAATAACAGGAGCTCCTTTGGAGGATGCACGCCACCTCACTCACCGGTATGACAAACTTCGTCAAGAGGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTGTTTCTGCAGAGAGTTCCATTAAGTTGAGGGATTCTTCTGTTTCTTCAGAGAGTTCCATTAGGCTTCAAAATGCAGAAACAAGGTTGAAAGAGCTTAAATCTGCCTTGGCAGCACTTGGTAAAGAAGCAACGGCTGCCATGCTGTCAGTTGAAGAACAACAGCAACAGATAACTCTCCAGAGCCTTTGTACAATGGTGGATGCTGAGAGAGCCTATCATCGGCATGCCCTTGTTATTCTAGAGAAACTATGTTCTGAGATGATTGTGGAGAGACAACCAAAAGAGTCTACATCATTTTCACTGCCAAAAGATGGATATGATCAACCTGCAGATGAGATTGCTAATGCAAATGGCTTTAAGCACAACAGTCAAACAGGCACGTACTTTTTTGCAAAGGTCATACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTCTATCAGTTGATGATTATGTTGTAGTTCGTCAGGTTGGTCCTAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGGTTTCCCTCTGCTTATGTACAGAGACAGGAGTTAATACCAGCCAGCAAGAGAGTTGAATAA 1122 0.4332 MDAIRKQASKLREQVARQQQAILRQLGQLSNEPLMTDESELECHQQLRKLFTSTKTAKHFQRHIVRGIEGFISVSTKQMEIVRKLAKDCCKYGTENQGSSYPLATASLQLGNSYDILENERETLLGFLGDQISEPLRAQITGAPLEDARHLTHRYDKLRQEVEAQAAEVLRRRSKLRDSSVSAESSIKLRDSSVSSESSIRLQNAETRLKELKSALAALGKEATAAMLSVEEQQQQITLQSLCTMVDAERAYHRHALVILEKLCSEMIVERQPKESTSFSLPKDGYDQPADEIANANGFKHNSQTGTYFFAKVIHPFDAQAEGELSLSVDDYVVVRQVGPNGWSEGECKGNAGWFPSAYVQRQELIPASKRVE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01365 373 Coils Coil 195 222 - -
Rops1g01365 373 ProSiteProfiles Src homology 3 (SH3) domain profile. 306 365 IPR001452 GO:0005515
Rops1g01365 373 SMART SH3_2 309 364 IPR001452 GO:0005515
Rops1g01365 373 Coils Coil 1 21 - -
Rops1g01365 373 SUPERFAMILY SH3-domain 309 364 IPR036028 GO:0005515
Rops1g01365 373 Coils Coil 148 179 - -
Rops1g01365 373 Gene3D SH3 Domains 309 363 - -
Rops1g01365 373 Gene3D Arfaptin homology (AH) domain/BAR domain 41 279 IPR027267 -
Rops1g01365 373 PANTHER SH3 DOMAIN-CONTAINING 17 362 - -
Rops1g01365 373 Pfam Variant SH3 domain 313 361 IPR001452 GO:0005515
Rops1g01365 373 SUPERFAMILY BAR/IMD domain-like 42 267 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01365 Rops-Chr1 30398229 30402941 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01365 - - gmx:100816554 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01365 1 30398229 30402941 Rops1g01365 1 30398229 30402941 ECH