Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01357 ATGATGATGAGGAGGAGTGGTGGTAGTTCCCAGGTGGCTAAAACTGCATTTTTGGTGGCAAAGGGTTTAGGTGGTGCTCCTAACAAATGGGGTTGTTGGGTGAGAGCACCTTTGGTTTATGGCAATGGTGTAAGGAATGAAAGCACTTTGGCTTTGTCAGAGAAGGAGAATAACCATGAGGAGAAGATGGCTGATTCATCTTCATCTAACAGTGCTGCTGGTGGGAACAAAGAGGAAAAAGGGGTTGTGAGTTATTGGGGGGTTCAACCCTCTAAGGTTACCAAAGAGGATGGCACAGAATGGAAGTGGAATTGTTTTAGGCCATGGGAAACATACAAAGCAGACCTATCCATTGATCTGAAGAAACACCATGCACCGACTACGTTTCTGGACAAGATGGCTTATTGGACTGTCAAGTCTCTTAGATACCCCACTGATCTGTTTTTCCAGAGAAGGTACGGATGCCGAGCAATGATGCTTGAGACAGTGGCAGCTGTTCCAGGCATGGTAGGAGGCATGCTACTGCACTGCAAATCCCTACGAAGATTTGAGCACAGTGGTGGATGGATCAAAGGACTGCTAGAAGAAGCAGAGAACGAGCGCATGCACCTAATGACCTTCATGGAAGTGGCAAAGCCCAGGTGGTATGAGCGTGCTCTGGTGATAGCTGTCCAAGGCGTTTTCTTCAATGCATATTTCTTGGGGTATTTGCTCTCACCGAAATTTTCCCACCGCATGGTTGGTTACCTTGAGGAGGAGGCAATACACTCCTACACTGAGTTCCTTAAGGAGCTGGACAAGGGTAACATAGAGAATGTGCCAGCTCCAGCCATTGCCATAGACTATTGGCAGCTCCCACCAGACTCTACTTTAAGGGATGTGGTCATGGTTGTCAGAGCTGATGAAGCACATCATCGTGATGTCAACCACTTTGCATCGGACATACATTACCAAGGACGAGAGTTGAGGGAGGCTGCTGCTCCAATTGGTTATCACTAG 999 0.4765 MMMRRSGGSSQVAKTAFLVAKGLGGAPNKWGCWVRAPLVYGNGVRNESTLALSEKENNHEEKMADSSSSNSAAGGNKEEKGVVSYWGVQPSKVTKEDGTEWKWNCFRPWETYKADLSIDLKKHHAPTTFLDKMAYWTVKSLRYPTDLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKGLLEEAENERMHLMTFMEVAKPRWYERALVIAVQGVFFNAYFLGYLLSPKFSHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPDSTLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01357 332 FunFam Ubiquinol oxidase 85 329 - -
Rops1g01357 332 Gene3D Alternative oxidase 81 328 IPR038659 -
Rops1g01357 332 Pfam Alternative oxidase 122 312 IPR002680 GO:0009916
Rops1g01357 332 MobiDBLite consensus disorder prediction 55 77 - -
Rops1g01357 332 PANTHER ALTERNATIVE OXIDASE 36 332 IPR002680 GO:0009916
Rops1g01357 332 CDD AOX 149 316 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01357 Rops-Chr1 30266232 30270137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01357 25 332 Miscellaneous Gene Families AT3G22370 80.255 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01357 K17893 - gmx:547924 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01357 1 30266232 30270137 Rops1g01357 1 30266232 30270137 ECH