Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01351 ATGGGTTTGCAGGAGGATTTTGACCAGTATGCTGTGAAAGCCAAGACTCTGCCAGAGAGTACCTCAAATGAAAGCAAACTTATCCTTTATGGATTGTACAAGCAAGCCACTGTTGGGCCTGTCAACACCAGCCGTCCTGGAATGTTCAACATGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCAATGAGTGATTACATCACTAAAGTGAAACAGCTGCTGGAAGAGGCTGGCATGCCTGCTTGA 273 0.4725 MGLQEDFDQYAVKAKTLPESTSNESKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLLEEAGMPA* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01351 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Rops1g01351 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Rops1g01351 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Rops1g01351 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Rops1g01351 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Rops1g01351 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Rops1g01351 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Rops1g01351 90 Gene3D - 1 90 IPR014352 -
Rops1g01351 90 SUPERFAMILY Acyl-CoA binding protein 3 85 IPR035984 GO:0000062
Rops1g01351 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 2 84 - -
Rops1g01351 90 FunFam Acyl-CoA-binding domain-containing protein 5 2 90 - -
Rops1g01351 90 CDD ACBP 3 87 IPR000582 GO:0000062
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01351 1 90 Acyl Lipid Metabolism Gene Families AT1G31812 72.222 1.88e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01351 K08762 - mus:103982409 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01351 1 30189338 30191026 Rops1g01351 1 30189338 30191026 ECH