LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g01347	ATGGGTAAGGGTCATCCACAGAACTCGAGAACCGGCGACGACCTTCATGCGGCGGCGAGGTCCGGCGATCTCATCGCTGTTCAGTCAATTCTGGCTTCAAATCCTTTGGCCGTTAATTCAAGAGATAAGCATTCCAGAACACCACTACATTTAGCAGCATTTTCTGGGCAAACAGAGGTAGTCAGTTATCTCTGCAAGAACAAGGCTGATGTTGGTGCTTCTGCCATGGATGACATGGCTGCAATACACTTTGCCGCACAGAAGGGACATTTAGAAGTTGTCCGGGCTCTAGTTTCAGCTGGGGCCTCTGCCAAAGCCTCTACTCGCAAAGGGATGAGTCCATTACACTATGCTGCTCAAGGTTCCCATCTAGAACTTGTCAAGTACTTGGCTAAGAAAGGGGAAAGTCTTAGTGCCAAGACAAGGGCAGGGAAGACCCCTTTGGATCTTGCTACCAATGAAGAAGTCCGCACTTTTCTCGGGGAATTTGAAAGATCAGCTAAGAATGGAGAATCGAGAAACAAAGAGAAAGCTGAAGAATTTGATCCAAAGACATCATCCGTAACAGAATCGGAAGGTAATTTGAGTGCTGAACCTCCTACAGCTGCTGTTGATGAAGAAAATAGTGAGAGAGAAAAGAGGAAGGGTAATGAAGATGATGATGCAAGAGAAGACTCATCACAACCAAAAAAGGCTAGAGTTAAGTTAAGCCATCTCCAAAGTGAAGATGATATCCAAGAAGAAGAAGAAAACATGTAG	759	0.4545	MGKGHPQNSRTGDDLHAAARSGDLIAVQSILASNPLAVNSRDKHSRTPLHLAAFSGQTEVVSYLCKNKADVGASAMDDMAAIHFAAQKGHLEVVRALVSAGASAKASTRKGMSPLHYAAQGSHLELVKYLAKKGESLSAKTRAGKTPLDLATNEEVRTFLGEFERSAKNGESRNKEKAEEFDPKTSSVTESEGNLSAEPPTAAVDEENSEREKRKGNEDDDAREDSSQPKKARVKLSHLQSEDDIQEEEENM*	253

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g01347	252	Gene3D	-	9	186	IPR036770	-
	Rops1g01347	252	ProSiteProfiles	Ankyrin repeat profile.	44	76	IPR002110	GO:0005515
	Rops1g01347	252	PANTHER	ANKYRIN REPEAT PROTEIN	11	193	-	-
	Rops1g01347	252	Pfam	Ankyrin repeats (3 copies)	15	73	IPR002110	GO:0005515
	Rops1g01347	252	Pfam	Ankyrin repeats (3 copies)	82	160	IPR002110	GO:0005515
	Rops1g01347	252	ProSiteProfiles	Ankyrin repeat region circular profile.	77	103	-	-
	Rops1g01347	252	MobiDBLite	consensus disorder prediction	162	252	-	-
	Rops1g01347	252	MobiDBLite	consensus disorder prediction	204	242	-	-
	Rops1g01347	252	SMART	ANK_2a	110	139	IPR002110	GO:0005515
	Rops1g01347	252	SMART	ANK_2a	44	73	IPR002110	GO:0005515
	Rops1g01347	252	SMART	ANK_2a	77	106	IPR002110	GO:0005515
	Rops1g01347	252	MobiDBLite	consensus disorder prediction	162	186	-	-
	Rops1g01347	252	SUPERFAMILY	Ankyrin repeat	12	154	IPR036770	-
	Rops1g01347	252	ProSiteProfiles	Ankyrin repeat profile.	110	142	IPR002110	GO:0005515
	Rops1g01347	252	ProSiteProfiles	Ankyrin repeat region circular profile.	44	71	-	-
	Rops1g01347	252	PRINTS	Ankyrin repeat signature	93	107	IPR002110	GO:0005515
	Rops1g01347	252	PRINTS	Ankyrin repeat signature	45	60	IPR002110	GO:0005515
	Rops1g01347	252	ProSiteProfiles	Ankyrin repeat profile.	77	109	IPR002110	GO:0005515
	Rops1g01347	252	ProSiteProfiles	Ankyrin repeat region circular profile.	110	142	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops1g01347	9	154	Miscellaneous Gene Families	AT2G31820	34.000	1.91e-14	70.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g01347	-		-	lang:109349041	381.719

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops1g01347	1	30131352	30133135	Rops1g01347	1	30131352	30133135	ECH